Protein

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Genbank accession
AAC13001.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAGFYRYDQNLDKYVPMPVELLASEGEEYTAPKITQKFNEVETKTTEILNKVLTDDRYFTVTSSFKQDATLGIEYYVTKVTPKTTEAKKSMVQKTFAYDFEKSIDPTSSYFGTTNRETVLSMAKRKRSVVAINASGWRSNGEVMGLQIKDGVLYKDYDAAGYTGAEACVFFDDGTMKVYGNREVDADILISKGARNSFAFGIWLVKDSKPRTAQMTTWADLNVKHPRQAIGQRSDGTLVIITVDGRSLRSSGITAYDMPSLFLSEGCINAFLLDGGGSSQTAVEGKYINNISDGIERAVVDTLTISYPDDDTDSRFFEVQEGRGLATSLNRRVEFIESKPTWNVLDLGFSPDGLIDNTAKFKKALSDLSEKGGGKLHFPKGTYLIGKQNTTSASEKIELPSNVSIVGERRSYTKLLRNPNHSLDELLRITDHNYIEGIEIDGNSSVNKSSCRLIAGGNIKSFKMKDCSLVNATDRGVSIHGIGKSITIEGMYISNIANECINVAEGEIIKLIDSEITFSGTALWVGNAANIFTKNNLAKSLKTFVRYKNSQNAICSGNIITNNIDRAIWGSVREAVFSDNVFKQCHSDYHLYFIQEDTGTNDLIVTGNSVYSDVEGTAFIRTPSDIDRRRVSGNVGNIPSLNLD
Physico‐chemical
properties
protein length:644 AA
molecular weight: 71097,08140 Da
isoelectric point:5,75025
aromaticity:0,08851
hydropathy:-0,33866

Domains

Domains [InterPro]
PTHR40446
Unmapped
13–309
PTHR40446 IPR011050
IPR018711
STR
115–305
IPR018711 IPR012334
IPR018711
STR
128–304
IPR018711 IPR012334
IPR024535
ENZ
343–562
IPR024535
AAC13001.1
1 644
Architecture
STR
STR
STR 115-305 | STR 340-639 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAC13001.1
1 644
Domain Start End Length (AA) Confidence
N-terminal 1 123 123 0,5060
Central domain 124 633 511 0,6943
C-terminal 634 644 10 0,1589
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-123
Central
124-633
C-terminal
634-644

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SPBc2
[NCBI] 		2932878 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAC13001.1 [NCBI]
Genbank nucleotide accession
AF020713.1 [NCBI]
CDS location
range 24182 -> 26116
strand -
CDS
ATGGCTGGTTTTTATAGATATGATCAAAATTTAGATAAATATGTTCCGATGCCTGTTGAACTACTAGCTTCAGAAGGAGAAGAATACACCGCTCCTAAGATTACTCAGAAGTTTAATGAAGTAGAAACGAAAACAACAGAAATTTTAAACAAGGTATTAACTGATGACAGATATTTTACAGTAACAAGTTCTTTTAAACAGGATGCCACACTTGGTATTGAGTACTATGTTACAAAGGTTACTCCTAAAACAACCGAAGCTAAAAAAAGTATGGTGCAAAAAACGTTTGCATATGACTTTGAAAAATCCATTGATCCCACATCTTCTTATTTTGGTACAACAAATCGTGAAACAGTTTTAAGTATGGCAAAACGAAAAAGATCTGTTGTTGCAATAAACGCTAGTGGTTGGCGATCAAATGGTGAAGTCATGGGGCTTCAAATTAAAGACGGAGTTCTCTACAAAGATTATGACGCTGCTGGATACACAGGCGCTGAGGCTTGTGTATTTTTTGATGATGGAACTATGAAGGTTTACGGAAACAGAGAAGTTGATGCCGACATCCTAATTTCTAAAGGCGCACGAAACTCTTTTGCTTTTGGCATTTGGCTAGTTAAAGATTCTAAGCCAAGAACGGCTCAAATGACTACATGGGCAGATTTAAATGTTAAGCATCCTCGACAAGCCATTGGGCAAAGATCTGATGGTACACTAGTTATCATTACTGTAGATGGCCGCTCACTTCGATCCAGTGGTATTACAGCTTATGATATGCCATCTTTATTTTTATCTGAAGGCTGTATTAATGCATTTCTTTTAGATGGTGGTGGAAGCTCTCAAACTGCTGTTGAAGGAAAATATATTAATAACATTAGTGATGGCATTGAACGTGCAGTGGTCGATACCTTAACAATTTCATATCCTGATGACGATACAGATAGCAGATTTTTTGAAGTTCAAGAAGGAAGAGGTTTGGCAACAAGTCTAAACAGACGTGTAGAGTTTATTGAATCCAAGCCTACTTGGAATGTATTAGATTTAGGCTTCTCACCAGATGGCTTAATCGATAATACAGCTAAGTTTAAAAAAGCCCTTAGTGATTTATCTGAAAAAGGTGGAGGGAAACTACATTTTCCGAAAGGTACATATTTAATCGGTAAGCAGAATACAACTAGCGCTAGTGAAAAAATTGAACTCCCTTCAAATGTCTCAATTGTTGGTGAAAGACGATCCTACACTAAACTCCTTCGAAATCCAAATCACTCACTTGATGAATTGTTGCGAATCACAGATCACAATTATATAGAAGGCATTGAAATTGATGGCAATAGCAGTGTAAATAAGAGTAGCTGCCGATTGATCGCAGGTGGAAATATAAAATCATTTAAAATGAAAGACTGCAGCTTGGTTAATGCTACAGACCGAGGAGTGAGTATTCACGGGATCGGCAAGTCTATAACGATTGAAGGAATGTATATTTCCAATATAGCCAACGAGTGCATCAACGTTGCTGAAGGAGAAATTATTAAACTAATTGACTCTGAGATCACATTTAGCGGTACTGCCCTTTGGGTGGGTAATGCTGCAAATATCTTCACTAAGAATAACCTCGCAAAATCCTTAAAAACCTTCGTCCGGTACAAAAACTCTCAAAATGCAATTTGTTCAGGAAACATTATCACTAATAATATTGATCGCGCAATTTGGGGATCTGTAAGAGAAGCTGTTTTCTCTGATAATGTTTTCAAGCAATGCCACTCTGATTATCACCTTTACTTTATTCAAGAAGACACTGGAACAAACGATTTAATTGTAACTGGAAACTCAGTTTATAGTGATGTTGAAGGAACAGCTTTCATTAGAACTCCATCAGATATAGACAGAAGACGAGTGTCGGGTAACGTAGGTAATATACCTAGCTTGAACTTGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea54b5b71ec11a4785ce0567a2281732a0270aa0395bdf5bff487cfc7c2a467a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8462
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Introns and intein coding sequence in the ribonucleotide reductase genes of Bacillus subtilis temperate bacteriophage SPbeta Lazarevic,V., Soldo,B., Dusterhoft,A., Hilbert,H., Mauel,C. and Karamata,D. 1998 9465078 GenBank
The complete nucleotide sequence of the Bacillus subtilis SPbetac2 prophage Lazarevic,V., Duesterhoeft,A., Soldo,B., Hilbert,H., Mauel,C. and Karamata,D. 1999-05-01 — GenBank