Protein
View in Explore- Genbank accession
- WWS23213.1 [GenBank]
- Protein name
- long-tail fiber protein
- RBP type
-
TFTSPTSPTF
- Protein sequence
-
MADLKAGSTVGGNPIWHAGTFPLVPAGNSLTYRGKKVYTEIDKPQADDNDFVSKARGGEYAKNVHFVEGLSLNARGGSAEFIPGPGDGADYTTVNAKIQTWYGLGFGSSYGTEGVTIVFNLRNGDIKTKGNISVASGKFVIAGQAPTDNAHLTNKKYVDDRINTVSNVANAAVRKAGDTMTGVLRAEAGVVIVNKATSGEYAPRLDQVISRGVTIDFGTY
- Physico‐chemical
properties -
protein length: 220 AA molecular weight: 23151,57210 Da isoelectric point: 8,66824 aromaticity: 0,08636 hydropathy: -0,25909
Domains
Domains [InterPro]
DC_0466
STR
1–216
STR
1–216
IPR005601
STR
74–182
STR
74–182
1
220
Architecture
STR 1-216 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
220
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 155 | 155 | 0,3229 |
| Central domain | 156 | 209 | 55 | 0,1366 |
| C-terminal | 210 | 220 | 10 | 0,4745 |
Note: Constraints were applied during segmentation.
Fixed 105 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 105 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-155
1-155
Central
156-209
156-209
C-terminal
210-220
210-220
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Klebsiella phage KP01 [NCBI] |
3126733 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Klebsiella pneumoniae [NCBI] |
573 | cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WWS23213.1
[NCBI]
Genbank nucleotide accession
PP350798.1
[NCBI]
CDS location
range 53010 -> 53672
strand -
strand -
CDS
ATGGCCGATTTAAAAGCAGGTTCAACAGTTGGTGGAAATCCTATTTGGCACGCAGGTACTTTTCCTCTTGTGCCGGCAGGAAACTCCCTAACTTATAGAGGTAAAAAGGTTTATACTGAGATAGATAAACCTCAAGCAGATGATAACGACTTTGTGTCAAAAGCTCGTGGTGGCGAGTATGCTAAAAATGTTCATTTTGTAGAAGGCTTAAGCCTTAATGCTCGCGGCGGGTCAGCTGAGTTTATACCAGGTCCAGGAGATGGGGCTGATTATACCACAGTTAACGCAAAAATACAAACATGGTATGGGTTAGGATTTGGGTCTTCATATGGTACTGAAGGTGTAACTATCGTCTTTAATCTACGCAATGGCGATATTAAAACTAAAGGTAACATTTCCGTTGCTTCAGGTAAATTTGTTATAGCGGGTCAAGCCCCCACAGATAATGCTCACTTAACAAATAAAAAATATGTTGATGATAGAATAAATACTGTTAGCAACGTAGCTAACGCAGCAGTCAGGAAAGCTGGTGATACCATGACCGGTGTACTTAGAGCTGAAGCTGGCGTAGTTATAGTAAATAAAGCAACATCCGGTGAATATGCTCCTAGATTAGATCAGGTTATTTCACGCGGGGTAACAATAGATTTTGGCACATACTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
ab4b47d0215ac9a202b4a4e95e454689a2ea674e27185cde6aa635d20ec49c48
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50