Protein

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UniProt accession
Q5IGW2 [UniProt]
Protein name
Tailspike protein
RBP type
TSP
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSGCGDVLSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGVNDADKAVLWPKEDGGDGNYYAWRGPLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSVLIDRDYTFSNNETVNFSGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKGQSISSTLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGKDGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPYSQYPVHMLPLNHLIDNLLVRGSLGVGFDMDGKGLYVSNITVEDCAGSGAYLLTHETVFTNIAIIDTNTKDFPANQIYISGACRVNGLRLVGIRSTSGQGLTIDAPNSTVSGITGFVDPSRINVANLMEEGLGNSRINSFNNDSAALRLRIHKLSKTLDSGSVYSHINGGPGSGSAWTEVTAISGSLPDAVSLKINRGDYRAVEIPVAMSALPDNAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA
Physico‐chemical
properties
protein length:684 AA
molecular weight: 72930,69450 Da
isoelectric point:5,06080
aromaticity:0,08772
hydropathy:-0,18129

Domains

Domains [InterPro]
G3DSA:2.10.10.80
ATT
65–135
G3DSA:2.10.10.80 IPR011050
IPR040775
RBD
71–132
IPR040775 IPR015331
IPR012332
STR
136–684
IPR012332
IPR015331
RBD
138–684
IPR015331
Q5IGW2
1 684
Architecture
ATT
STR
ATT 65-135 | STR 136-684
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
Q5IGW2
1 684
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,9938
Central domain 155 598 445 0,9870
C-terminal 599 684 85 0,8386
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-598
C-terminal
599-684

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SS3e
[NCBI] 		293644 Uroviricota > Caudoviricetes > Sarkviridae > Jerseyvirus > Jerseyvirus SS3e
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAW51254.2 [NCBI]
Genbank nucleotide accession
AY730274 [NCBI]
CDS location
range 30645 -> 32699
strand -
CDS
ATGTCCAGCGGTTGCGGTGATGTATTGTCACTTAATGATTTACAAATAGCTAAAAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGTAAACAAGGCGGTGTAGCTGGTGGTGCGGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACGCTTCCCGCAGTCTTACGTGATGCTGGTTTCTCCCCGGCATCTTTTAACTTTACGACCGGGGGTACTCTCGGCGTAAACGACGCGGATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGACGGTAACTATTACGCATGGCGTGGCCCCCTGCCGAAAGTTATCCCTGCGGCGTCGACACCTCTTACGACAGGCGGCATTTCGGATTCCGCTTGGGTCGCGTTCGGAGATATTACCTTTCGCGCGGAAGCGGATAAGAAATTTAAATACTCCGTTAAGCTGTCCGACTTTACTACGTTACAACAATTGGCGGATGCCGCCGTTGATAGCGTTCTTATCGACCGCGATTACACTTTCAGTAATAACGAGACCGTTAACTTCAGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATTAAACCGTGGACCGACGATAATCAGTGGATAACCGACCCCGCGGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTTCCTGGTATAGAATCCCTTCTCCCTCCGGAAGCTAAAGGGCAAAGCATATCTTCTACCCTGGAAATTCGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGCGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGAAAAGATGGCGTAATTACCTTTGAAAACCTGAGCGGCGATTGGGGCAAGGGTAACTATGTTATTGGCGGGCGCACAAGTTACGGTTCGGTAAGTAGCGCTCAATTCTTACGAAACAATGGCGGTTTCGCGCGCGATGGCGGGGTCATCGGGTTTACCTCGTATCGCGCCGGCGAAAGTGGTGTTAAAACATGGCAAGGCACGGTAGGTTCTACGACCTCTCGTAACTACAACCTGCAATTCCGGGATTCGGCGGTGCTATACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACCGACATGAACCCAGAAGATGACCGCCCGGGGGATTTCCCGTATTCTCAATACCCGGTACATATGCTCCCCCTAAACCATTTGATCGACAATCTACTGGTTAGGGGTTCTTTGGGCGTAGGTTTCGACATGGATGGGAAAGGTCTGTATGTCTCTAACATAACCGTCGAGGATTGCGCTGGTTCGGGTGCATATCTTCTTACTCACGAAACGGTATTCACTAATATTGCTATAATCGACACAAATACTAAAGATTTTCCAGCGAATCAGATCTACATCTCCGGGGCCTGCCGTGTGAACGGTCTTCGTTTGGTAGGCATACGCTCCACTAGTGGACAGGGGTTGACGATAGACGCGCCTAACTCCACGGTAAGTGGTATAACCGGCTTCGTAGACCCCTCAAGGATTAACGTAGCCAATTTGATGGAGGAAGGTCTTGGTAACTCTCGCATAAACAGTTTCAATAATGATTCTGCGGCGCTTCGGTTACGGATACATAAACTGTCAAAGACCCTTGATAGTGGTTCCGTGTACTCCCACATAAACGGCGGCCCAGGTTCTGGTTCAGCGTGGACAGAAGTCACAGCTATTTCGGGCAGCTTGCCCGATGCCGTGTCATTAAAAATAAATAGGGGCGATTATCGTGCTGTTGAGATACCGGTAGCGATGTCCGCCCTACCAGACAACGCTGTCAGGGATAACGGGTCTATATCACTGTATCTGGAAGGCGATAGCCTTAAGGCGTTAGTTAAGCGGGCCGATGGAAGCTATACAAGATTAACTTTGGCATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
06a387dcbd7f1b8eb760ed0123817635c888942b3a9d3b8b2c56e616b6e3488c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
— — 22923809 PubMed