Protein

View in Explore
Genbank accession
WWT36647.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,72
Protein sequence
MADLQRIQFKRTSTAGRKPDANILTPGELAINLADRELYTKDDSNNVITLGHFRGELPTDANLDNYGPTGKFTGIWSKSTSTNAQPANKFPEENAVGVLEVFTAGQFAGTQRYTTRYGNVYIRSLSAKWNGVDGPWGVWRNIQSGTRPLSTTIDLNDLGGAEHFGLWRNSSNTIATFDRNFPEEGSSAQGLLEVYEGGKYSRTQRYTTRFGVVYTRCLAAAWDASAPKWGPWQQVGNVTPATFYDGNLNDFKTPGLYNILGTDAVINCPTGEGLPPVIVGLLEVKQRASGGAIFQKFTTAGTGATTRGRIFERAYTNGVWGTWNEVYTSYSLPITLGMGGVKAQLTELDWQTFDFVPGGMYSVPLNKVKNMPANMDWGTIDGNLIMLSVGPSEHTGTGRTVQVWRGTVSQANYRYFVVRVAGNPGNRTNTVRRIVVEDGRHTWTAQQDFNGVVNFGSSTTFKSTTTFNTEVKFRSSNAFKMYGGNFGTIFRNDGESLYILSTDENDQDGNFNTNRPFRYQFKTGDVTLGGTSGADILRLKSSSLAATFGGDVNLSKGTLTFEAGGKQSRDYFRFNHWGDSNNARDNIIQLEDSKGAHFSTERTLATGAIKTKFFGEVESDGRLTIKRPGDAIVLSTTASNSLHIRGDIGGNNNWYIGKGGADNSLAFYSYATQAGIHITNNGEIALAPQNFNNVSISKDRIYINATQWVANHSGSWDGQWREEAPIFIDQGSVGQDSYYPLIKGHSQITGQGYSTKADFGLRRTPGTWGQAVIRVGSAEATPGANHPQGVFEFHANGQFYCPLIQTPRIGVGTVPVWGGASIAIGDNDTGLAHGGDGRINLMANGQHIASWGIFHQEHPGLWSVGAALWTEVDKAIISHGHLIQANDNYSTYVRDIYIRSDIRVKKDLVKFENASQTLSKINGYMYLQKRGVNEDGSERWEPNAGLIAQEVQAILPELVEGDPVGENLLRLNYNGVIGLITAAINEHTEEIALLKEENKILRERLAAIEAKLFG
Physico‐chemical
properties
protein length:1014 AA
molecular weight: 111012,09060 Da
isoelectric point:6,47347
aromaticity:0,10454
hydropathy:-0,41519

Domains

Domains [InterPro]
DC_0538
STR
1–268
DC_0538 DC_0339 Coil
cd19958
STR
54–142
cd19958 cd19958 DC_1909 IPR048390 G3DSA:6.20.80.10 IPR030392
cd19958
STR
247–327
cd19958 IPR030392
DC_0594
RBD
908–1012
DC_0594
WWT36647.1
1 1014
Architecture
STR
STR
ATT
STR
RBD
STR 1-352 | STR 430-459 | ATT 460-517 | STR 518-935 | RBD 936-1012 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WWT36647.1
1 1014
Domain Start End Length (AA) Confidence
N-terminal 1 808 808 0,2026
Central domain 809 1003 196 0,1428
C-terminal 1004 1014 10 0,9937
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-808
Central
809-1003
C-terminal
1004-1014

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UPWr_E1
[NCBI] 		3127569 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWT36647.1 [NCBI]
Genbank nucleotide accession
PP418985.1 [NCBI]
CDS location
range 56582 -> 59626
strand -
CDS
ATGGCAGATTTACAGAGAATCCAATTTAAAAGAACAAGTACGGCAGGTCGCAAGCCGGATGCGAATATTCTAACTCCGGGTGAACTTGCTATTAACCTAGCGGATCGAGAACTATATACAAAAGATGACAGCAATAATGTAATTACTTTGGGACACTTTCGCGGCGAATTGCCAACTGATGCAAATTTAGATAATTATGGACCGACTGGTAAATTTACTGGCATTTGGTCTAAATCTACTTCAACAAATGCGCAACCTGCAAATAAATTCCCAGAAGAAAATGCTGTTGGTGTATTGGAAGTGTTTACGGCTGGGCAATTTGCTGGAACTCAGAGATATACAACTAGATACGGAAATGTTTATATTCGTTCTTTGTCTGCTAAATGGAATGGTGTTGATGGTCCGTGGGGTGTGTGGAGAAATATTCAATCCGGTACTCGTCCATTGTCAACCACAATTGATCTTAATGATCTAGGTGGCGCGGAACATTTTGGTTTGTGGCGGAATAGTTCAAATACCATTGCTACCTTTGACAGAAATTTCCCAGAAGAAGGATCGTCCGCTCAAGGACTTTTAGAAGTATATGAAGGTGGAAAATATTCTCGCACACAGAGATATACGACCAGATTTGGTGTTGTTTATACTCGTTGTCTTGCTGCTGCGTGGGATGCTTCTGCGCCTAAATGGGGACCGTGGCAACAAGTAGGTAATGTCACACCAGCGACTTTCTATGACGGAAACCTGAATGATTTTAAAACTCCAGGTTTATATAATATTTTAGGCACTGATGCCGTTATTAACTGCCCTACAGGTGAAGGTTTGCCGCCTGTTATTGTTGGTTTGCTGGAAGTTAAACAGCGTGCTTCTGGTGGTGCTATTTTCCAAAAATTTACTACTGCCGGAACAGGTGCAACTACTCGCGGACGTATTTTTGAGCGCGCATATACTAATGGCGTTTGGGGTACATGGAACGAAGTATATACATCTTATTCTCTGCCAATTACTTTGGGTATGGGTGGTGTTAAAGCTCAATTAACAGAGCTAGACTGGCAAACATTTGATTTTGTTCCTGGCGGGATGTATAGCGTACCGCTGAATAAAGTCAAGAACATGCCAGCAAATATGGATTGGGGAACGATTGACGGTAACTTAATTATGTTATCCGTTGGACCTAGTGAGCATACCGGAACAGGTCGCACCGTTCAGGTTTGGCGTGGTACTGTGTCACAAGCTAACTACCGTTATTTTGTCGTTCGTGTAGCTGGTAATCCGGGAAATAGAACTAATACCGTTCGCCGTATTGTTGTGGAAGATGGTCGCCACACATGGACAGCACAACAAGATTTTAATGGTGTTGTTAACTTCGGTAGTTCAACAACGTTTAAATCAACTACAACTTTTAACACAGAAGTTAAATTCCGTTCATCCAATGCATTTAAAATGTATGGCGGTAATTTTGGTACAATTTTCCGTAATGATGGTGAAAGTCTTTATATTCTTTCCACCGACGAAAATGATCAAGATGGAAACTTTAACACAAATAGACCTTTCCGTTATCAATTCAAAACTGGTGATGTTACTTTAGGTGGAACTAGCGGTGCTGATATTTTAAGATTAAAAAGTAGTTCGCTTGCTGCTACCTTTGGTGGTGATGTTAATTTAAGTAAAGGTACGCTGACGTTTGAAGCGGGTGGTAAGCAATCACGCGATTATTTCCGGTTTAATCATTGGGGTGATAGCAATAATGCTCGTGATAACATTATTCAGTTAGAAGATAGCAAAGGCGCTCATTTTTCCACTGAACGTACTTTAGCGACGGGTGCAATTAAAACTAAGTTCTTTGGTGAAGTTGAATCCGACGGTCGACTAACCATTAAACGTCCGGGTGATGCGATTGTACTATCGACTACCGCTAGCAATTCTTTGCATATTCGCGGTGATATAGGCGGAAATAATAACTGGTATATTGGTAAAGGTGGTGCGGATAATTCGCTAGCATTTTATAGCTATGCAACTCAGGCTGGTATACACATCACGAATAATGGCGAGATAGCACTTGCGCCACAAAATTTTAATAATGTTAGTATTAGCAAAGACCGCATCTATATAAACGCTACACAGTGGGTTGCTAATCATTCCGGTTCATGGGACGGACAGTGGCGCGAAGAAGCACCTATCTTTATTGATCAGGGTAGTGTTGGACAAGATAGCTATTATCCACTTATTAAAGGACATAGCCAGATCACAGGTCAAGGATATTCTACTAAGGCTGACTTTGGCTTACGTCGTACTCCCGGAACATGGGGACAAGCTGTTATTCGTGTTGGATCTGCGGAAGCTACACCAGGGGCTAACCATCCACAAGGTGTGTTTGAGTTTCATGCTAACGGACAGTTTTATTGCCCTTTGATTCAAACTCCTAGAATTGGTGTTGGTACGGTTCCGGTTTGGGGAGGCGCATCAATTGCTATTGGTGATAATGACACTGGTTTAGCGCATGGTGGTGATGGACGTATTAACCTGATGGCAAACGGACAACATATTGCCTCATGGGGTATCTTCCATCAAGAACATCCTGGATTATGGAGTGTTGGTGCTGCTTTATGGACCGAAGTTGACAAAGCTATTATTTCTCATGGTCATTTGATTCAGGCGAATGACAACTATTCGACATATGTTCGTGACATTTATATCCGTTCTGATATTCGCGTGAAGAAGGATTTAGTTAAATTTGAAAATGCATCACAGACACTTTCAAAAATTAACGGTTATATGTATCTTCAAAAACGCGGAGTAAATGAAGACGGTAGCGAACGATGGGAGCCTAATGCTGGTTTGATTGCTCAAGAAGTTCAAGCCATTTTACCGGAACTAGTTGAAGGCGATCCGGTTGGTGAAAACCTTCTTCGTTTGAACTATAACGGTGTTATTGGTTTAATTACTGCTGCAATCAACGAACACACAGAAGAAATTGCACTTCTTAAAGAAGAAAATAAAATTCTTCGTGAACGTCTTGCTGCAATTGAGGCTAAATTATTTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5f120978da3980fbaa0cedc23ea2f23dbbda25f39b1156bf309e9aa4b0426a8d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6483
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage cocktail for biofilm control in poultry environments Sliwka,P., Saez Moreno,D., Korzeniowski,P., Milcarz,A., Kuczkowski,M., Koziol,S., Narajaczyk,M., Kolenda,R., Roesler,U., Tomaszewska-Hetman,L. and Kuzminska-Bajor,M. 2014-04-04 — GenBank