Protein

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Genbank accession
QJI53350.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MAVTTLDLVQTNGTPLPSELTVLEGEVEYNGSGLVAATAPAALNFNHKDTAIVSYTIVDTALSDDLVVLQYRYTNDGSVTSVTIYYNFAISRLTTVETIAGENIYRRDTFLSDYNFGDMVKISVVPANDLITIYINGVRVYGYETELNKGVASSTIKLNGTAPVLTELEYTDSNEGNSDIQSPLAALPLSLIGKSTQFQKLGIMHNKPSTMSFVREFWAETVDTSMFPGWPTTRYPRARFSCTDHDTGSGGIWVRVYDKDLGAITDPSSWLEWDDVSSRPEFDHIERKINPVFVYSGTGDQTETPMHLVAADGDILMYFHNSTVTLEGFPAGIQATHYATTLNGIDYTDPTPSSIVYDPTYLEGDGHTGYFQPGRNTFAEIPYKYIGIHLHGGAGASRGSCWAIEVSNDGKNWERWRTFMRDFQATKRLPYTDEEDKFFVLQRVHEAKRVGGYYRVWGRWQREAFGGRLGELEAVEVLVDSDFNIVSECNVFIPRGSEGEFDAVEIRGYFPFEYGGVEYATYSTRLGTTIDDESAIGIGIVTDVNRNWQIYNGMANKSRTLLVDRSNFPEKVSSSETIVLKTEAGYQYQSLPIRRDNSISTLISNDPVDLSGQITDVTFKNIGKDSAAPIYLEFGITDSLSNPTQQLSISFDTDHDVVTGCIPMLMRIIGTVGTQEVRSINVFGMDNDNPSVYETANTKHELTIRIDKHNNEIQFLSGGSVTDTLPLAGFVADTPMFVFIKAGTIDPDETEDSSVSFNEISVQSATADKLVELVNAHPIADAGPDQSGISAGSTFQLDGSGSYDSDGSIVGYEWVQVDNGAPSVAPFDTTAVQPMVTAPSIGTPTTLRFELVVEDDDGAFSVADAVNVEVTSTPNVGPTANAGTPSTIEAGSQYQLNGSASDSDGTIVSTVWTQTGDAVTLSNPNVLNPTFTAPLVSSGSTTFTLTVTDDDGETATDTVVITYEDTTAPVITRNGPATVTLNLNDTFTPATFTAFDAVDGDLTSAITVVNPYQPATGEYTVTANVSDAAGNAATEVTQVVTVTDDISYPFNTVSSENIPFGNNVVLQTTIRLGSTRCFNVNLSSWCNPEELYSHQIDVSGTGLSIVNSQIQGGILVFYAQGLAVGRHKFKITYSTQSRQDYFYAYVEVSSYEGL
Physico‐chemical
properties
protein length:1154 AA
molecular weight: 125407,01740 Da
isoelectric point:4,33348
aromaticity:0,09792
hydropathy:-0,19445

Domains

Domains [InterPro]
IPR029865
Unmapped
755–962
IPR029865 IPR013783
IPR022409
ENZ
774–873
IPR022409 IPR035986 IPR032179
IPR035986
STR
775–873
IPR035986 IPR022409
IPR013783
STR
776–877
IPR013783 PF22352
PF22352
RBD
782–870
PF22352 IPR013783
QJI53350.1
1 1154
Architecture
STR
STR 775-1047 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJI53350.1
1 1154
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2349
Central domain 11 294 285 0,6686
C-terminal 295 1154 859 0,2459
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-294
C-terminal
295-1154

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AcoS-R7M
[NCBI] 		2729541 No lineage information
Host Alteromonas confluentis
[NCBI] 		1656094 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJI53350.1 [NCBI]
Genbank nucleotide accession
MT345684 [NCBI]
CDS location
range 16928 -> 20392
strand +
CDS
GTGGCAGTAACCACACTTGATTTAGTACAAACTAACGGTACGCCGTTGCCGTCTGAACTGACTGTTCTTGAAGGGGAGGTTGAATACAATGGGTCAGGCTTGGTAGCTGCTACTGCCCCTGCGGCGCTTAATTTCAACCATAAAGATACGGCCATAGTTAGCTACACGATTGTAGACACCGCCCTATCAGACGACTTAGTTGTTCTCCAATACCGATATACAAATGACGGTTCGGTAACGAGCGTTACTATCTATTATAATTTCGCAATTTCCAGACTCACCACAGTCGAAACGATAGCCGGAGAAAATATCTACAGACGTGATACTTTTCTCTCTGATTACAACTTCGGGGATATGGTCAAGATATCCGTCGTACCAGCTAATGATTTAATCACTATATATATCAATGGTGTTAGGGTTTATGGTTATGAAACTGAGTTAAACAAGGGGGTTGCTAGTTCTACTATAAAGTTGAATGGAACAGCACCGGTACTCACTGAACTTGAGTATACAGATTCTAATGAAGGCAATAGTGATATTCAGTCTCCACTGGCTGCGTTACCTCTTTCGCTGATTGGTAAATCTACTCAGTTCCAAAAACTGGGGATAATGCACAACAAACCTAGCACAATGAGTTTCGTCCGCGAGTTCTGGGCGGAAACTGTAGATACTTCTATGTTCCCCGGCTGGCCTACCACTCGCTACCCTCGCGCACGATTCAGTTGTACCGACCACGACACTGGCTCAGGCGGCATATGGGTACGTGTTTACGATAAAGATTTAGGTGCAATTACGGACCCTTCATCGTGGTTAGAGTGGGACGATGTGAGTAGCCGCCCAGAGTTCGACCACATTGAGCGCAAAATTAATCCAGTATTTGTATACAGTGGCACAGGCGATCAGACGGAAACGCCTATGCATCTAGTAGCAGCTGACGGGGATATACTCATGTATTTCCACAACTCAACCGTTACACTGGAAGGTTTCCCCGCTGGAATACAAGCAACGCACTATGCCACAACTCTGAACGGCATCGACTACACCGACCCTACACCGTCTAGTATTGTTTATGACCCTACCTATCTGGAGGGTGACGGTCATACTGGGTACTTCCAGCCGGGGCGCAATACTTTTGCTGAAATCCCTTACAAATATATTGGTATACACCTACACGGTGGCGCGGGTGCCAGCCGAGGTTCGTGCTGGGCTATTGAAGTTTCGAACGATGGAAAAAACTGGGAGCGGTGGCGAACGTTTATGCGCGACTTTCAAGCCACTAAACGCCTACCGTATACCGACGAGGAAGATAAATTTTTCGTTTTGCAGCGCGTGCATGAAGCGAAGCGCGTGGGGGGTTACTATCGTGTGTGGGGCCGCTGGCAACGTGAAGCCTTTGGGGGCCGACTTGGTGAGCTTGAGGCGGTAGAAGTGCTGGTTGATAGTGACTTTAATATTGTATCTGAGTGTAACGTATTCATACCGCGTGGCAGTGAGGGAGAATTCGACGCAGTAGAAATTCGTGGATATTTCCCTTTTGAATATGGGGGTGTAGAGTACGCAACCTATTCAACCCGACTCGGTACAACCATTGATGACGAAAGCGCCATTGGCATAGGGATTGTCACCGATGTTAATCGTAACTGGCAGATTTATAACGGCATGGCTAACAAGAGCCGAACGCTGTTGGTCGATAGAAGCAACTTTCCAGAAAAAGTATCATCCTCTGAAACGATAGTGCTGAAAACCGAAGCTGGCTATCAGTATCAGTCTCTGCCTATCCGCCGTGACAATAGTATCTCTACGCTAATCAGCAATGACCCAGTTGACCTGAGTGGTCAGATAACTGATGTTACTTTCAAGAATATCGGTAAAGATTCAGCGGCACCCATCTACCTTGAGTTCGGTATTACTGATTCGCTTTCCAATCCAACACAACAGCTTTCTATATCGTTCGATACCGATCATGATGTAGTGACGGGATGTATCCCGATGCTAATGCGGATAATCGGCACAGTAGGTACTCAGGAAGTCAGATCCATTAACGTATTTGGCATGGATAACGACAACCCAAGCGTATATGAAACTGCCAATACTAAACACGAACTGACCATTCGGATCGACAAGCACAACAATGAAATACAATTTCTATCAGGCGGCAGCGTCACGGACACTTTACCGCTAGCGGGCTTTGTGGCAGATACACCCATGTTTGTGTTTATCAAAGCGGGTACTATTGACCCTGATGAAACTGAGGATAGCAGCGTATCGTTTAATGAAATCAGTGTGCAAAGCGCTACAGCAGACAAGCTTGTCGAGCTTGTTAATGCGCACCCGATTGCAGATGCAGGCCCTGACCAATCTGGGATAAGTGCGGGGTCTACATTCCAACTGGACGGTTCCGGTTCTTACGATTCAGATGGCTCTATCGTTGGCTATGAATGGGTACAGGTTGACAATGGTGCGCCGTCCGTAGCGCCGTTTGATACAACGGCAGTACAGCCTATGGTTACCGCTCCGTCAATCGGAACACCTACAACGCTACGGTTTGAATTAGTCGTAGAAGATGATGACGGAGCGTTTAGCGTTGCAGATGCGGTAAATGTAGAGGTTACATCAACACCAAACGTAGGTCCAACCGCCAACGCAGGCACGCCTTCGACCATTGAAGCCGGTAGCCAATACCAGTTAAACGGCTCTGCGTCAGACAGTGACGGCACAATCGTATCTACGGTGTGGACGCAGACGGGTGACGCTGTAACGCTGTCCAACCCTAACGTGCTGAACCCAACGTTCACCGCGCCGCTGGTTAGTTCAGGTAGCACAACGTTCACGCTGACAGTAACGGATGATGATGGTGAAACGGCTACTGATACTGTGGTTATCACGTATGAGGACACTACAGCTCCAGTTATTACCCGCAATGGGCCTGCAACGGTAACGCTAAACCTGAACGATACGTTCACGCCTGCTACGTTTACGGCGTTTGACGCTGTTGACGGTGACTTGACAAGCGCAATCACGGTGGTCAACCCGTACCAACCGGCTACCGGTGAGTACACCGTCACGGCTAACGTGTCAGACGCCGCAGGAAACGCCGCAACAGAAGTGACGCAGGTTGTAACGGTAACAGATGATATCAGCTATCCGTTTAATACGGTGTCGTCTGAAAATATTCCGTTTGGGAATAATGTTGTTTTACAAACCACAATACGTCTTGGCTCTACCCGTTGCTTTAACGTTAATCTTTCTTCATGGTGTAACCCTGAAGAATTGTATAGCCACCAAATTGACGTTTCTGGTACAGGGCTATCCATAGTTAATAGTCAAATACAAGGTGGAATCTTAGTGTTCTACGCGCAAGGTCTAGCAGTGGGTCGTCACAAGTTTAAAATCACCTATAGTACTCAATCACGACAAGACTACTTCTACGCTTATGTGGAAGTAAGTTCATATGAGGGGCTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c4f50a69947f66ae38731a1923acde6b440139b7aa92a298f45430b89361502
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2942
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Novel Phage Infecting Alteromonas Represents a Distinct Group of Siphophages Infecting Diverse Aquatic Copiotrophs Ma,R., Lai,J., Chen,X., Wang,L., Yang,Y., Wei,S., Jiao,N. and Zhang,R. 2021 34106770 GenBank