Protein

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Genbank accession
AGN12300.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,60
Protein sequence
MAFNRELSQFGHYIVVDDTTGKIAITSTTTPNIGFGTTNPQFKVDVAGDINFTGDIYRQGEKFTSGVGIGSTTSNPVSAEISNKIGVGFTDINFVGAGMTVTGYGTTIVVDFTNLAVKSDATIPSLTILSSSVNVDSNTSYLTNTVGAGFTVTLPLTKNPGDFIELHDTEVSWGINNLMVATQNNEQFKNFSGVIDSPLACDVDGATVKLVWTNTYWRVFA
Physico‐chemical
properties
protein length:221 AA
molecular weight: 23535,96260 Da
isoelectric point:4,45370
aromaticity:0,09955
hydropathy:0,06018

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Prochlorococcus phage P-SSM5
[NCBI] 		536454 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN12300.1 [NCBI]
Genbank nucleotide accession
HQ632825 [NCBI]
CDS location
range 112158 -> 112823
strand -
CDS
ATGGCATTCAATAGAGAGCTGTCACAATTTGGTCATTATATAGTAGTTGATGACACTACTGGTAAGATTGCTATTACCAGTACAACAACTCCTAATATTGGATTCGGAACTACAAATCCACAATTTAAAGTGGATGTTGCTGGTGATATTAATTTTACTGGTGATATCTATAGACAAGGTGAAAAATTTACTTCTGGTGTTGGTATTGGATCAACAACAAGTAATCCAGTTTCAGCAGAGATAAGTAATAAAATTGGTGTAGGATTTACTGACATCAACTTTGTTGGTGCTGGTATGACTGTTACTGGTTATGGAACTACTATAGTTGTTGACTTTACCAACCTTGCTGTTAAATCAGATGCTACAATACCATCATTAACTATACTAAGTTCAAGTGTTAATGTTGATTCTAATACGAGTTATCTGACTAATACTGTAGGTGCAGGATTTACTGTAACTCTTCCCTTAACTAAGAACCCTGGAGATTTTATTGAACTTCATGATACGGAAGTAAGTTGGGGCATAAATAATCTTATGGTTGCAACCCAAAATAATGAGCAGTTTAAAAACTTTTCAGGCGTGATTGATTCTCCTTTAGCATGTGATGTCGATGGTGCTACTGTAAAATTAGTTTGGACCAACACTTACTGGAGGGTATTTGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
af8605c0d29560af65355319818932df9418a676d501752677112279e1c7d9c6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7457
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Prochlorococcus phage P-SSM5 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank