Protein

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Genbank accession
XCN26240.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MRIELTDYNSDPSTTIKIYRHYFPFDAEDLPPVLVELPGNTSSYTDETLILNTMVYYRISVVHNGNEVVGPLYTTMKRYYTGPQIDKNVPDRILRGDSYIGRYGTLPLNVILSIDEAKKLVPSCTVLEGIDHETIEVEKCSYHGNVLFISNIPVFYGSPEDLYNDGALLSYGDGLGVFSRTFYDSLTTKVEQGKPVTYNNYSFKFRLMTTSEYAELYVKLYPDSPMGLTCDRVIGNCNTHSYKSPVVDIGSQGNKFRTVGLDGVSSDTEWTTKGPLYMVVELMNRGDMAWPSPDVNIIPADPTDRMMFCQSEIINGRAHFFGGVYSHFNSYASATTKHISINLDGSDRQVHADMPVGVYNACTWVNGNKIYCMGGAKKIGSSEYTYAELYNDIQVWEDDGTPEGSWSTITNSLQFYYGASVTKYYDKITDRQRLLYIGGYGNVIPSGQYNFATADLDTFDGTFTVYNRSNFYDGGGGPIAPHEDYFLWVAPERSTNGFTNATYKLTIPEDTDSYTYRTKITQQGTELPTTKGGKIHIWRDTIFMYGSASLDEKQGELYLYQFVPNENRWLKITVAVPGLSNSSRASLNGAFYEDKLVLMHNQPWLNESFTSSFYVIRLIDPIDAPIIPVTDVQVGTSRIFTTYAEVSI
Physico‐chemical
properties
protein length:648 AA
molecular weight: 72902,81150 Da
isoelectric point:4,92558
aromaticity:0,12963
hydropathy:-0,32454

Domains

Domains [InterPro]
DC_1242
ATT
1–212
DC_1242 IPR015915
IPR015915
STR
299–600
IPR015915
DC_2226
RBD
563–648
DC_2226
XCN26240.1
1 648
Architecture
ATT
STR
RBD
ATT 1-212 | STR 276-618 | RBD 619-648
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCN26240.1
1 648
Domain Start End Length (AA) Confidence
N-terminal 1 70 70 0,8714
Central domain 71 325 256 0,8049
C-terminal 326 648 322 0,4434
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-70
Central
71-325
C-terminal
326-648

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_FBPa36
[NCBI] 		3231237 No lineage information
Host Pseudomonas sp.
[NCBI] 		306 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCN26240.1 [NCBI]
Genbank nucleotide accession
PP813861 [NCBI]
CDS location
range 107717 -> 109663
strand +
CDS
ATGAGAATTGAATTAACTGACTATAATTCAGATCCATCCACTACTATAAAGATATATCGACATTATTTCCCATTTGATGCAGAAGATTTGCCGCCCGTGTTAGTTGAATTACCTGGTAATACAAGTAGCTACACCGATGAGACTCTTATACTCAACACCATGGTTTATTACAGGATATCAGTCGTGCATAATGGCAATGAAGTAGTTGGTCCTTTATACACAACAATGAAACGTTATTATACTGGACCACAAATTGATAAGAATGTCCCAGATAGAATCTTACGTGGTGATAGTTATATTGGCCGATATGGTACATTACCTTTGAACGTCATATTGTCAATAGATGAAGCTAAAAAATTAGTACCATCATGTACTGTACTTGAAGGAATCGATCATGAAACAATAGAGGTCGAGAAGTGTAGTTATCATGGGAACGTGTTATTTATTTCTAATATACCTGTTTTCTATGGTAGTCCTGAAGATCTTTATAATGATGGTGCTCTACTATCATACGGAGACGGATTAGGTGTATTCAGCCGCACATTTTACGATTCTTTAACAACTAAAGTTGAGCAAGGGAAACCTGTAACGTATAACAATTATTCATTTAAGTTCAGACTGATGACAACAAGCGAGTATGCTGAACTATATGTTAAGTTATATCCAGATTCCCCTATGGGTCTTACATGTGATCGAGTTATAGGTAATTGTAACACGCATTCATATAAATCACCAGTCGTAGATATCGGATCACAGGGTAATAAATTCAGAACAGTTGGATTAGATGGAGTGTCTTCAGACACAGAGTGGACTACTAAGGGACCACTTTATATGGTGGTCGAGTTAATGAATAGAGGTGATATGGCATGGCCAAGCCCTGATGTAAATATCATTCCTGCTGATCCAACTGATCGCATGATGTTCTGTCAATCTGAAATTATTAACGGACGTGCCCATTTCTTTGGTGGTGTTTATAGCCATTTTAATTCATATGCATCTGCCACTACTAAACATATCAGTATTAATTTGGATGGATCTGATAGGCAAGTACATGCGGATATGCCAGTTGGGGTATATAACGCATGTACTTGGGTTAACGGGAATAAAATCTACTGTATGGGCGGCGCCAAAAAGATAGGCAGTAGCGAATATACGTATGCTGAATTATACAATGACATTCAGGTATGGGAGGATGATGGTACGCCAGAAGGTTCTTGGTCAACTATAACGAATAGTTTACAATTTTATTATGGTGCTAGTGTTACGAAGTATTATGATAAAATCACTGATCGTCAAAGACTTTTATATATTGGCGGGTATGGTAATGTAATTCCTTCCGGACAGTATAATTTTGCAACAGCGGATCTGGATACATTTGACGGTACATTTACAGTCTATAATCGGTCTAATTTCTACGACGGTGGCGGCGGTCCAATAGCACCACATGAAGATTATTTCTTATGGGTTGCTCCAGAAAGAAGTACTAATGGTTTTACAAATGCGACATATAAATTAACTATACCTGAAGACACTGACTCGTATACATATAGAACCAAGATAACTCAACAAGGTACAGAATTACCAACCACCAAAGGTGGTAAAATTCATATTTGGCGAGATACTATCTTCATGTATGGCTCGGCATCTCTTGATGAGAAACAAGGTGAGTTATACTTATATCAATTTGTACCTAATGAAAACCGCTGGTTGAAAATAACCGTAGCGGTACCAGGATTAAGTAATAGCAGTAGAGCATCTTTAAATGGAGCGTTTTACGAAGATAAGCTCGTGCTTATGCATAATCAACCTTGGCTTAATGAATCGTTTACATCAAGTTTCTATGTTATTCGATTAATCGATCCAATCGATGCACCAATCATCCCAGTCACAGATGTACAAGTTGGCACAAGTCGGATATTTACAACTTATGCTGAGGTTTCGATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0d605fa6975af3d3f05cdd0b2b2429e147f1d5e28a4c39475205e0655e08ab58
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7052
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Defense systems in Pseudomonas aeruginosa van den Berg,D.F. and Costa,R.A. 2024-11-19 — GenBank