Protein

View in Explore
Genbank accession
WNO47247.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,71
Protein sequence
MATQPTNPIIKIAENNVNLPSTGQPNKNEPSYPLQTTGYDNDQVVTAEELNYIFDNFGEWLKYLNEVTEDTSFTGDDGINLTSNSLNSNIGISVDSSVARTTTTITAGNGLVGGGDLSDNRSVTLGTPSTLSGTTTNAAVTESHTHKLDMASQAEAEAGTDSNKLMSPETVHQAIPFTFSPSSVSGSTGSTTLPNGLIMKWGSGTSTIDTAETFNFSSPFPNACFVINTQTIQASQLSLSVSSKNASGFTIDRAETIGGSVPFDYFAIGY
Physico‐chemical
properties
protein length:270 AA
molecular weight: 28382,59830 Da
isoelectric point:4,21685
aromaticity:0,07407
hydropathy:-0,29519

Domains

Domains [InterPro]
DC_0413
STR
1–263
DC_0413
G3DSA:2.60.40.3940
RBD
183–270
G3DSA:2.60.40.3940
IPR054075
RBD
193–270
IPR054075
WNO47247.1
1 270
Architecture
STR
STR 1-270
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VibM_10AMN
[NCBI] 		3075960 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WNO47247.1 [NCBI]
Genbank nucleotide accession
OR472329.1 [NCBI]
CDS location
range 42294 -> 43106
strand -
CDS
ATGGCAACACAACCAACAAACCCTATCATCAAGATAGCGGAAAATAATGTAAATTTACCTAGCACAGGGCAACCTAACAAGAACGAACCCAGCTACCCTTTACAGACTACAGGTTATGATAACGATCAAGTTGTAACGGCAGAAGAGCTTAATTATATTTTCGATAATTTTGGAGAGTGGTTAAAGTATCTTAATGAGGTAACAGAGGATACATCTTTCACTGGGGATGATGGAATCAATCTAACTAGCAATAGTTTAAATTCTAATATAGGTATCTCTGTAGATAGCAGCGTTGCTAGGACAACGACAACTATTACAGCCGGAAATGGACTAGTAGGGGGAGGAGATTTAAGTGATAACAGATCTGTAACTTTAGGAACCCCTTCTACACTAAGTGGTACCACAACCAATGCAGCAGTAACAGAATCACATACGCATAAGCTTGACATGGCATCTCAGGCAGAAGCAGAAGCGGGTACTGATAGTAACAAACTGATGTCCCCTGAGACAGTACACCAAGCAATACCTTTCACTTTTTCACCTTCTAGTGTAAGTGGTTCCACAGGATCTACAACTCTTCCCAACGGATTGATTATGAAATGGGGTAGTGGAACATCTACCATAGATACAGCAGAAACGTTTAATTTCTCATCCCCGTTCCCTAATGCTTGTTTTGTAATTAATACACAGACTATTCAAGCATCTCAGTTGAGTTTAAGTGTCTCATCTAAAAATGCAAGTGGTTTTACAATCGACAGGGCAGAGACAATTGGCGGGAGTGTTCCTTTTGATTACTTTGCAATAGGCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1809a874a9379b047f9edfb20dc45be4bcbce75e06ede4e73e9bb97c63fba3b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7275
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50