Protein

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UniProt accession
A0A8S5UBC5 [UniProt]
Protein name
50S ribosomal protein L28
RBP type
TSP
Evidence RBPdetect
Probability 0,71
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MIKHSAEYDSAVVADSRKQLVRAVFDLVDPDATINSITPNEEGPISNSAQVANRGNDESPDTIATLELNRWVLDGSFTIRPSDPADRRGQVGWEGESLSGQDGSFSEPYPYIEISVSNIEILQAVTMQFPSKTADGYPTEFEIHVWSGDNLLYTRAVTNNRDTSVVIDGFTVNYPTRARLTIKKWSLPNRVVRVLRLLFGLYETWDTKVLQSVDILTEVTFSGLKIPYSTCDIRVENKDHRFDPYAPNTIFTSIEDRQRIVVELGLYLEDGTVEWLPGGTYYQQSAGWKLQDLTVEWSLVDVIGALTKRNFIVPETLPTKVAGWVEAIMASLGANFRTNYIVEDAVKDISITATKDDIKDKKCGEMLRFLCMAINAWPRQDFATGYLRVGKLAQDEGNRITLDNMYEYPEMSANDDIADITFKLDNNNEVTFSGNNTESEVSLSVDNPFIHTEADARKAVISCLFEYGGRSFSVKSRGNPSSECGDIQAVDTQFKSTISARLYKQQLTLEDGVMRSSPSELVQSPNDSMYQNKIILTGSGTWTAPQAGAIKLTLIGGGNGGMGGGGGNMLWGDSFDPKDNDGGIGGNGGKVFIIETTATKNQAYTYACGAAGTGGAGGAKGQDGTKGTDGGATTFGVFTSANGKIYTSGLMDIQSGAVYAQKGADYAGTITGLEGSGGAGGKQGRNGKYAQRKDKETGMYHTYVAARATEGTAGENGKPGCVIVEW
Physico‐chemical
properties
protein length:726 AA
molecular weight: 78647,72710 Da
isoelectric point:4,83100
aromaticity:0,08815
hydropathy:-0,36405

Domains

Domains [InterPro]
DC_1070
STR
181–531
DC_1070
A0A8S5UBC5
1 726
Architecture
STR
STR 181-531 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5UBC5
1 726
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,5295
Central domain 100 376 278 0,2419
C-terminal 377 726 349 0,4492
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-376
C-terminal
377-726

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ct8Cp41
[NCBI] 		2825358 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF91698.1 [NCBI]
Genbank nucleotide accession
BK016059 [NCBI]
CDS location
range 19762 -> 21942
strand -
CDS
ATGATTAAACACAGCGCAGAATACGATTCCGCCGTCGTGGCTGATTCCAGAAAACAGCTAGTCCGGGCAGTGTTCGACCTGGTAGACCCAGATGCAACCATTAACAGCATCACTCCCAATGAGGAAGGGCCTATCTCCAACTCCGCACAGGTGGCGAATCGTGGCAACGATGAAAGCCCGGATACCATAGCAACGCTGGAACTGAATCGCTGGGTACTGGATGGGAGTTTTACCATCCGGCCCAGCGACCCAGCGGACAGGCGGGGACAAGTTGGCTGGGAAGGGGAGAGCCTATCCGGTCAGGACGGGAGCTTTTCCGAACCCTATCCCTACATCGAAATCTCAGTATCCAACATCGAAATATTGCAGGCCGTCACAATGCAGTTTCCCAGCAAAACAGCGGACGGATACCCAACTGAGTTTGAAATCCATGTTTGGAGCGGCGATAACCTGCTGTATACCAGGGCTGTGACGAACAACCGAGATACCAGTGTGGTAATTGATGGATTCACCGTGAACTATCCCACACGGGCGCGGCTGACTATCAAGAAGTGGTCCCTGCCCAATCGTGTTGTCCGGGTTTTGCGCCTGCTATTTGGTCTGTACGAAACATGGGACACGAAGGTTTTGCAATCTGTGGATATCCTGACAGAGGTGACTTTCTCAGGGCTGAAAATCCCGTATTCGACCTGTGACATTCGGGTAGAAAATAAAGACCATCGTTTCGACCCCTACGCCCCCAACACGATTTTTACATCTATCGAAGATCGGCAAAGAATAGTCGTGGAGCTGGGTCTGTACCTGGAAGATGGGACAGTAGAATGGTTGCCTGGTGGCACCTACTACCAGCAAAGCGCAGGTTGGAAGCTACAAGACCTTACTGTTGAATGGTCCCTTGTGGACGTTATCGGGGCGCTGACCAAGAGGAATTTCATCGTCCCCGAAACCCTGCCAACGAAGGTAGCCGGTTGGGTAGAGGCTATCATGGCAAGTCTGGGCGCAAACTTCCGCACAAACTACATCGTGGAAGATGCTGTAAAGGACATTTCCATTACAGCCACAAAAGACGATATCAAGGACAAAAAATGCGGTGAGATGCTACGTTTCCTGTGCATGGCAATCAACGCATGGCCCCGGCAGGATTTTGCAACCGGCTACCTGCGTGTCGGCAAGCTGGCCCAGGACGAAGGGAATCGAATTACCCTAGATAACATGTACGAATACCCGGAAATGTCGGCAAACGATGATATAGCGGATATCACGTTTAAGCTGGACAACAACAACGAAGTCACTTTTTCCGGGAATAACACCGAATCCGAGGTATCCCTGAGTGTGGATAACCCGTTTATTCACACAGAAGCGGATGCCAGAAAGGCAGTTATATCCTGCCTGTTCGAGTACGGCGGACGTTCGTTCAGCGTGAAAAGTCGGGGCAATCCATCCAGCGAATGCGGGGACATTCAGGCGGTTGATACGCAATTCAAAAGTACCATTTCCGCCCGTCTGTACAAGCAACAACTCACCCTAGAAGATGGTGTTATGCGTTCCAGCCCGTCCGAACTGGTGCAGTCTCCCAATGATTCCATGTATCAGAACAAAATTATCCTCACTGGTTCCGGTACCTGGACAGCGCCTCAAGCCGGTGCTATCAAACTCACGCTGATTGGCGGCGGCAATGGTGGCATGGGCGGCGGCGGCGGCAATATGCTGTGGGGTGATTCCTTCGACCCGAAGGATAACGATGGCGGCATCGGCGGCAATGGCGGCAAGGTATTCATTATCGAAACAACCGCCACCAAAAACCAGGCATACACCTACGCTTGCGGTGCAGCTGGTACCGGTGGCGCTGGTGGTGCAAAGGGGCAGGATGGTACCAAGGGAACAGACGGCGGCGCTACCACGTTTGGCGTGTTCACGTCGGCAAACGGCAAAATCTACACCTCTGGTTTGATGGATATTCAGAGCGGCGCTGTGTACGCTCAGAAAGGCGCTGACTATGCCGGTACAATCACCGGCCTAGAAGGTTCGGGCGGCGCAGGCGGCAAGCAAGGCCGCAATGGTAAGTACGCCCAGCGCAAAGATAAGGAAACCGGCATGTACCATACCTATGTTGCCGCACGGGCAACGGAGGGAACAGCCGGGGAGAATGGAAAACCTGGGTGTGTAATCGTAGAATGGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
1b3b30dee94a461bc59948f84486c21a181fdfc1a04e28aaee90a7ab32ebefca
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9066
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50