Protein

View in Explore
Genbank accession
XKC19622.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSSSKDLDIDLDDDWGLDDDLDLDMDFEPGTTPLPEGREAVLQAPKTAAKKAAETIVGKSKRRKLILDSLPSDYTVAAEAYDTVASEGRKVYQEAKTQLTQTKRDLQRTTREAMPMLQRYLPESMTKKIGNWAKGEEEYTGGYGNEDPRENALAAMLTDTFGAQQELAQQERAEDKVQQDIKDQADTIRQDDLNKIISGIRSDTANMVAYNQVSDKYRRKMLEVNWRQYYVLSDLLQTTQTAMEKLIPNSDAIVKNTALPDYAKEEFSEISAAMMKRTIIENSTPAKFAREYLSKLGDNSVQAIKEFGSSAREVISMGSQVAAMQDDGGQGVELSPAQQRAQMAQTGAELAGSAFANRYITPQVQKIQKYLREKGEANETVASLGSKLRYYGTTMPEYLNDLARDAYAERNSGFESIAANMLSSILPSYTGDTARMENVTAEALAKASPWSKRNDITLNEVIPEWLATIDQSINRLGGVDTGKQTYDWTTKSLVNESEIQERIATRAADVETREYVRKGIDELVEKLTKDADLSDGAKEDLGRVIDEKIRTVGRFNVADLADNMDTYGSVGNSEHLLDLQQFFSDIRDEGKKTEQSVNVEVSDEIRRLRDAIAPIQDVVDEMSNLYGGTMVAKSGIFEHENGRSTLNRDLTSTYSNYTPKFEHQPKPELRSGSNIEEVIKGLADTLNRQEAQRPTTNVDMEELKKAVRSNSARPVAESIRSEDLSDLRDSSWFSNEIQFEMYSKLTDALDRTSGFDMSSLATGITGGVREALFGEEEPNLMTALRKIAKDKESGDSSSTLDGLVEQVRDQLVANNLSEEVGSILQVLQDMSERGVPVVDVSGDAEATTADKPGYFGRFGQHVKSGAGKVRRGAGRVKDAISDRLTKVREKFPNFSVWDKLNGARKGVAAGLNSMVDSFQGVTDIRDEDGNIVLLGRKLKAGMYFDENGKVIKSIKDITGAVYDKNGVVLTEEEVREKKDQFTYYTQKGWKKLSEGIGRLAGGGLRNAFGVPQAILSQVSDLGKKVINKVRTSKDIYVQGESVPRLQHQLMLRGFYIDRNTGKVIRSAADITGPVYNKHKEVIISQEDFDNPDVKFVDVDGNPFESLMSKVGSRIKSAVNFGMDKAVAAKDFVKDLAGGAIDRLGAAKDWALGKIRGDGAEKVGRRSTNKIIDKLDEIYQLLDDRLTKQDSKMEDVLDPIDSDKSEEIFGDVDGDGDRDGSFKDIFEKRREAREKKKAERAEARRNKKDAKGEKKPSQGFFSWLAGGLGGALKGVMGSLGGVLAGSFATKALGMLGDGLGSIFNKINPFGGSPDVPDGPGKGKKPGLLKRAAGGLWKGAKALGRGALTAGSFIGRQVLWQGARMAGAAALGAIGTISAPVVLTAAAVAAVGYGAYKLATRVVNGPLMKLRMAQYGTEDYSDGKSDEVAKLLYLEDALLKHTSYNNEGISTVKGVDEQTTMEMAKQFGVATDEPKAVEMFERWVHGRFIPVFLLWTTRARQQAPGVALNNLDDTSKVEPEAMAKILDGVKLPVDHPIFRVMHSPFGDRGMFDTIGGWFGGDDMMSGEAVKEVEAESAEEIAELVKDAKKDKKSNSGKVATVEGADANSADGIDPEWYKLSKDNVVKNDDGSVTVGGKNFRDMKTYRKVRDAYRRRDESTGGNAGTIALKQNADGDFTSLRDPSNLNAVESVRLRAYGLHDLSVDKVKLLWGLEETVIKHISATGKSATINLDSTIIAERFMAKFGLNYEDSAHRAKWKSWFESRFIPVLMRYVISLKQYAANADPLQAMVSTSTPYMLDVALAIVGLRTMFENNEVSIWSVNVSPFKDISSLNGDPTSVDGNIQYLRDNQRRAKAMEQTAGQDEEIRMDTTEVKQVTKPKPKSSGTEMSRSIIDRVRNGSTMTMDSGSGTVTTSAGGTYRPDAGGIPIGEMGEGVDPNSAYAKIRLRGNDKESVANMIKEVSKASGVDENLLLTVAMMESSMNPQAGASTSSAKGLFQFINGTWKAELKKHANKYGIPATAGPFDPVANALLGAEYLRSGAKTVEKAMPDGVKAGPADLYLAHFLGPGGASKFLRNLYKTPDRIAAEDFMQPAASNPGVFTDKGRLLSYRAIHEKLQRRAENRFSYVSKYASNPVLKQAPMAAANDDAKSVKEATPNVVGTDEGRTQIAKVKATKDIEKAVTQRTAVEAAPTSIGSSAVPTPAISEVVKTSVKEMETQTPDFDANKYVDQVRQELDARISSKERELSDLKESMAKHSVEENEKSRTLMEKQLSFLEEMAMSLRQLNEKVGFNGSSREAEQRSRAHQQERQRMAQTITHDRGPISMARQRT
Physico‐chemical
properties
protein length:2328 AA
molecular weight: 255304,21870 Da
isoelectric point:5,73178
aromaticity:0,06357
hydropathy:-0,55322

Domains

Domains [InterPro]
DC_0124
STR
1–2051
DC_0124 Coil Coil
Coil
Unmapped
89–112
Coil Coil G3DSA:1.10.530.10
IPR023346
STR
1953–2074
IPR023346
IPR008258
ENZ
1955–2043
IPR008258
XKC19622.1
1 2328
Architecture
STR
RBD
STR 1-2074 | RBD 2075-2121 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage pVp-JHP1101
[NCBI] 		3374749 No lineage information
Host Vibrio parahaemolyticus SNUVpS-1
[NCBI] 		1234128 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio > Vibrio parahaemolyticus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XKC19622.1 [NCBI]
Genbank nucleotide accession
PQ451753.1 [NCBI]
CDS location
range 138521 -> 145507
strand -
CDS
ATGAGCAGTAGTAAAGATCTAGATATCGATCTAGATGATGATTGGGGTCTTGACGATGACCTTGATTTGGACATGGATTTTGAACCCGGTACGACTCCTCTGCCTGAGGGTCGCGAAGCGGTTCTCCAAGCGCCAAAGACCGCTGCTAAGAAAGCAGCTGAAACCATCGTCGGTAAGTCCAAGCGCCGCAAGCTAATACTCGATAGTCTACCTAGCGATTATACCGTTGCAGCGGAAGCATATGATACCGTGGCATCCGAGGGTCGTAAGGTCTATCAGGAAGCCAAAACACAATTAACCCAAACTAAGCGTGACCTCCAACGTACGACACGTGAAGCTATGCCAATGCTTCAACGTTATCTGCCTGAATCAATGACCAAGAAAATTGGTAACTGGGCTAAAGGTGAAGAAGAGTACACTGGTGGGTACGGTAATGAAGACCCGCGTGAGAATGCTCTCGCAGCGATGCTTACTGATACGTTTGGTGCACAACAAGAATTAGCACAACAGGAGCGTGCTGAAGATAAAGTCCAACAAGACATTAAAGACCAAGCCGACACGATTCGTCAGGACGATTTGAATAAAATCATTTCTGGTATCCGTAGTGACACGGCAAATATGGTTGCGTACAACCAAGTCAGTGACAAATACCGTCGTAAGATGTTAGAAGTTAACTGGCGTCAGTACTACGTATTGAGTGACTTGTTGCAAACCACCCAAACTGCGATGGAGAAACTGATCCCAAACAGTGACGCCATCGTTAAGAACACGGCATTGCCTGATTACGCTAAAGAAGAGTTTAGTGAAATCTCAGCAGCAATGATGAAACGCACCATTATTGAGAACTCAACTCCCGCTAAGTTCGCAAGAGAGTATCTGTCGAAACTGGGTGACAACAGTGTTCAGGCTATCAAGGAATTTGGTAGTTCTGCCCGCGAAGTCATTTCCATGGGTTCTCAAGTCGCTGCCATGCAAGATGACGGTGGTCAGGGCGTAGAGTTGTCTCCTGCACAACAGCGTGCTCAGATGGCTCAGACGGGCGCAGAATTGGCAGGCTCTGCTTTTGCCAATCGATACATCACCCCTCAAGTTCAGAAGATTCAAAAGTATCTTCGTGAGAAAGGTGAAGCGAATGAAACTGTTGCAAGTCTAGGCTCTAAACTTAGATACTACGGCACAACTATGCCAGAGTATCTGAATGATTTAGCAAGAGATGCGTATGCAGAACGTAATAGCGGTTTTGAAAGTATTGCAGCAAACATGCTGTCAAGTATTTTACCGTCGTATACGGGCGATACTGCCCGTATGGAAAACGTAACTGCGGAGGCATTAGCTAAAGCATCGCCATGGTCAAAACGTAACGACATTACCCTGAATGAAGTTATTCCAGAATGGTTAGCGACCATCGACCAATCTATTAACCGCTTAGGTGGTGTAGATACAGGTAAGCAGACCTATGACTGGACAACTAAGTCATTGGTTAATGAAAGTGAAATTCAAGAACGTATTGCAACACGTGCTGCCGATGTGGAAACGCGTGAGTATGTACGTAAAGGAATTGACGAGTTAGTTGAGAAATTGACTAAAGATGCTGACCTATCGGATGGTGCTAAGGAAGACCTAGGTCGAGTCATCGATGAGAAGATCCGTACTGTAGGTCGCTTTAATGTAGCTGACCTTGCAGATAACATGGACACTTACGGTTCGGTAGGTAATAGTGAACACTTACTTGACCTACAACAGTTCTTCTCAGATATCCGTGATGAGGGTAAGAAGACAGAACAAAGTGTTAACGTCGAAGTATCAGATGAAATCAGACGTCTTCGTGACGCGATTGCTCCGATACAAGATGTGGTTGATGAAATGTCTAACCTATACGGTGGGACGATGGTGGCTAAGTCAGGCATCTTCGAACATGAGAATGGTCGTTCAACGCTTAATAGAGACTTAACCAGTACGTACAGTAACTACACACCAAAGTTTGAACATCAACCTAAGCCAGAACTCCGCAGTGGCTCTAACATTGAAGAAGTCATTAAGGGTCTGGCAGATACACTGAACCGTCAAGAAGCTCAGCGTCCTACAACTAATGTTGATATGGAGGAGTTGAAGAAAGCGGTTCGTTCTAACTCTGCACGTCCGGTTGCTGAAAGTATCCGTAGTGAAGACTTAAGTGACTTGCGCGATAGCTCATGGTTCTCTAACGAGATCCAGTTTGAGATGTACTCTAAGTTAACTGATGCATTAGACCGCACTAGCGGATTCGATATGTCCAGTCTAGCTACAGGCATCACAGGTGGTGTTCGTGAAGCGCTCTTTGGTGAGGAAGAACCTAACCTAATGACGGCGTTGCGTAAAATCGCTAAAGACAAAGAGTCTGGTGATTCTAGTTCAACACTCGATGGGTTAGTGGAACAAGTTCGCGACCAGTTAGTCGCAAACAACCTCAGTGAAGAAGTCGGTTCTATCTTACAAGTTCTGCAAGATATGTCAGAACGTGGTGTGCCTGTTGTAGATGTGTCTGGCGATGCAGAAGCAACAACTGCTGATAAGCCGGGCTACTTTGGTCGCTTTGGTCAACACGTTAAATCAGGTGCAGGTAAAGTGCGTCGCGGCGCAGGTCGCGTTAAAGACGCTATAAGTGATCGTCTAACCAAAGTGCGTGAGAAGTTTCCAAACTTCTCAGTATGGGATAAGTTAAACGGTGCACGCAAAGGGGTTGCTGCCGGACTGAACAGCATGGTTGATTCATTCCAAGGAGTTACAGACATTCGAGATGAAGATGGCAACATCGTTCTTCTTGGTCGTAAACTCAAGGCGGGCATGTATTTTGATGAAAACGGAAAAGTCATCAAGTCGATTAAGGACATCACTGGGGCTGTTTATGACAAAAACGGTGTGGTTCTTACTGAAGAAGAAGTCCGAGAGAAGAAAGACCAATTTACGTATTACACGCAAAAAGGTTGGAAGAAACTCTCGGAGGGTATTGGTCGACTAGCAGGTGGTGGCTTACGTAATGCCTTCGGTGTTCCGCAGGCTATCCTTAGTCAAGTATCCGACCTCGGTAAGAAAGTAATTAACAAAGTACGTACCTCAAAAGACATTTATGTCCAAGGGGAAAGTGTGCCACGTTTACAGCATCAGTTAATGCTGCGTGGTTTCTACATCGACCGTAATACAGGTAAGGTGATTCGCAGTGCTGCGGATATCACAGGTCCGGTTTACAATAAGCATAAAGAGGTTATCATCTCGCAAGAGGACTTTGATAATCCTGATGTTAAATTTGTCGATGTGGATGGGAACCCATTCGAATCGCTTATGTCCAAAGTAGGGTCGCGTATTAAATCTGCGGTTAACTTTGGTATGGATAAAGCGGTTGCCGCTAAGGACTTTGTTAAAGACCTAGCAGGCGGTGCAATAGACCGATTAGGTGCTGCTAAAGATTGGGCATTAGGAAAAATTCGTGGAGACGGTGCTGAAAAGGTTGGTCGTCGTTCAACCAATAAAATCATTGACAAGTTAGATGAGATTTACCAGTTACTGGATGATCGTCTAACTAAGCAAGACTCTAAGATGGAGGATGTGCTTGACCCGATTGACTCAGACAAGTCTGAAGAAATCTTTGGGGATGTTGATGGTGATGGTGATCGCGATGGTAGCTTTAAAGACATCTTTGAGAAACGACGCGAAGCAAGGGAGAAGAAGAAAGCCGAACGCGCTGAAGCTAGACGCAACAAGAAAGATGCGAAAGGCGAGAAGAAACCTAGTCAAGGATTCTTTAGCTGGCTAGCAGGCGGATTAGGCGGTGCGCTGAAAGGCGTAATGGGTTCACTGGGTGGTGTACTTGCAGGCTCTTTTGCCACTAAGGCTCTAGGGATGTTAGGTGACGGCCTGGGATCTATCTTTAACAAGATTAATCCATTTGGCGGCTCACCAGATGTTCCAGACGGACCTGGAAAGGGTAAGAAGCCTGGACTGTTAAAACGTGCAGCGGGTGGATTATGGAAAGGTGCTAAAGCATTGGGACGTGGTGCACTTACAGCAGGTAGTTTTATCGGTCGTCAAGTATTGTGGCAAGGTGCTCGAATGGCAGGTGCCGCAGCACTAGGTGCTATTGGTACTATCTCTGCGCCAGTAGTGTTAACCGCAGCAGCCGTTGCGGCTGTAGGTTACGGTGCGTACAAGTTAGCGACTCGTGTAGTAAACGGTCCACTAATGAAGTTACGCATGGCACAGTACGGTACAGAGGACTACAGTGACGGTAAGTCTGACGAAGTAGCTAAACTGCTTTATCTTGAAGACGCATTGTTGAAACATACCTCATATAACAATGAGGGTATCTCAACAGTGAAAGGGGTAGATGAACAAACAACTATGGAAATGGCTAAACAGTTCGGCGTAGCCACTGATGAACCAAAAGCTGTAGAAATGTTTGAACGTTGGGTACATGGTCGTTTCATTCCTGTATTCTTACTCTGGACAACGCGTGCAAGACAGCAGGCACCGGGTGTAGCGTTGAACAATCTGGATGATACTTCTAAAGTAGAACCAGAAGCGATGGCTAAAATCCTAGATGGTGTTAAGTTGCCAGTTGACCATCCAATCTTCCGAGTAATGCATTCACCGTTTGGTGATCGCGGTATGTTCGATACGATTGGTGGTTGGTTCGGTGGCGATGACATGATGTCTGGTGAGGCTGTCAAAGAAGTAGAGGCAGAATCCGCTGAGGAAATTGCTGAACTTGTGAAAGACGCTAAGAAAGACAAGAAGTCTAATTCCGGTAAGGTGGCTACTGTAGAGGGTGCTGACGCTAATAGTGCAGACGGTATTGACCCTGAGTGGTACAAGTTATCTAAAGACAACGTCGTGAAGAACGATGATGGCTCGGTAACTGTAGGCGGTAAGAACTTCAGAGATATGAAAACGTATCGTAAGGTGCGTGATGCATATCGACGTCGTGATGAGTCAACAGGTGGCAATGCAGGTACAATAGCCTTGAAGCAGAATGCTGATGGCGACTTTACTTCGCTACGCGACCCAAGTAACCTCAATGCGGTGGAGTCAGTCCGTTTACGTGCGTACGGTTTACATGACTTGTCAGTTGATAAAGTCAAGTTGCTGTGGGGATTAGAAGAAACGGTGATTAAGCACATTAGTGCAACAGGCAAGTCGGCTACGATTAATCTAGACTCAACCATTATAGCTGAACGCTTTATGGCGAAGTTTGGGTTGAACTATGAAGATAGTGCACATCGTGCTAAGTGGAAGTCTTGGTTTGAATCACGTTTCATCCCAGTATTGATGCGTTATGTAATCTCGCTAAAACAATACGCAGCAAATGCCGACCCATTACAAGCAATGGTATCTACATCTACACCATATATGCTTGACGTAGCATTAGCTATTGTTGGGTTACGTACGATGTTTGAGAACAATGAAGTCTCAATCTGGTCAGTGAACGTGTCACCATTTAAAGATATCTCGTCACTTAACGGTGACCCGACGTCCGTAGATGGTAACATTCAGTATCTCCGCGATAACCAACGTCGTGCTAAAGCGATGGAGCAAACCGCAGGACAAGACGAAGAAATTCGTATGGATACTACTGAAGTTAAGCAGGTTACTAAGCCAAAACCAAAATCCAGCGGTACGGAGATGTCAAGAAGTATTATTGACAGGGTTCGTAATGGATCAACCATGACAATGGATAGCGGTAGCGGTACAGTAACTACCAGTGCGGGAGGCACATACCGACCTGACGCAGGCGGTATTCCAATCGGTGAAATGGGTGAGGGTGTTGACCCTAACAGTGCTTACGCTAAGATTCGTCTGCGTGGTAATGATAAAGAGTCAGTCGCCAACATGATTAAGGAAGTGTCAAAAGCCAGTGGTGTTGATGAGAACTTGTTATTGACTGTAGCTATGATGGAGTCGTCAATGAACCCGCAAGCGGGTGCGTCTACTTCATCTGCGAAAGGTCTGTTCCAGTTCATCAACGGTACATGGAAAGCAGAGCTGAAGAAACACGCTAACAAGTATGGTATTCCAGCAACAGCGGGACCATTCGATCCGGTAGCGAACGCACTCTTGGGTGCGGAGTATTTACGTTCTGGCGCTAAGACAGTGGAGAAAGCGATGCCTGACGGCGTTAAAGCTGGTCCTGCTGATTTGTACTTAGCACACTTCTTAGGTCCGGGTGGTGCATCTAAGTTCTTACGTAACTTATATAAAACACCTGACCGCATTGCAGCAGAAGACTTTATGCAACCTGCGGCATCTAACCCTGGAGTATTTACTGATAAGGGACGTTTGTTAAGTTATCGTGCAATCCACGAGAAGCTACAACGTCGTGCTGAGAACCGATTCTCATACGTATCTAAGTATGCTTCAAACCCTGTCCTTAAACAAGCACCGATGGCAGCAGCTAACGATGATGCCAAGAGTGTGAAAGAAGCAACACCAAACGTAGTGGGTACTGATGAAGGTCGTACTCAAATTGCTAAGGTGAAAGCGACTAAGGACATTGAAAAGGCAGTAACGCAGCGCACTGCTGTAGAAGCTGCACCAACCTCCATTGGTTCAAGTGCTGTCCCTACTCCAGCTATATCGGAAGTGGTTAAGACAAGCGTGAAAGAGATGGAGACTCAGACTCCAGATTTCGATGCTAACAAGTACGTTGATCAGGTTCGTCAAGAACTCGATGCGCGTATCTCTAGCAAAGAACGTGAACTGTCAGACTTGAAAGAGTCAATGGCGAAACACAGCGTCGAAGAGAATGAGAAATCGCGTACACTGATGGAGAAACAACTATCCTTCCTAGAAGAGATGGCGATGTCACTACGTCAGTTGAACGAGAAAGTTGGTTTCAATGGTTCAAGTAGAGAAGCTGAACAACGATCACGTGCACACCAACAGGAGCGTCAGCGTATGGCGCAAACCATCACGCATGACCGTGGGCCAATCAGTATGGCACGTCAGCGCACATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
36767f1474c00517f8d52aa4ab13107029b807964e9d42f940eca2270451e71c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,4540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome of Vibrio phage pVp-JHP1101 Park,J.H., Kim,S.G. and Park,S.C. 2025-12 — GenBank