Protein

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Genbank accession
YP_009831285.1 [GenBank]
Protein name
long tail fiber protein distal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,65
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLKAGTTVGGNTIWSQANLPLLPSGNTITYKGFKIYTENDKPTKAEIGLGNVTNDAQVKKAGDDMTGNLTLTNNASLTLPRRINFVSDNSSAVYTVATRSDNNAVTDPFPSSETRVYSLLVNTKSHTSDPAGGATLAAHLFNQKASGAGSMFIQVFGPPNKTTGASGSVTGQLLMNGENGQLQMTGSGLTIGMQTVVSGTIFGTQMSIKGDSNRNLFFQDAGGNELSLIYADTGKNLYVRTGGGAYATRFASDGTLVLANHLTVPGQATFNGLGVFNNRASVGVDYDSQGTNSAILRVDTSGDGNGVGDGVTHLGYKDGNGRYNHYFRGTGSIYLTNKLGTIFTSQSYYNDVPQGTPAQYFLPTVGQGAKNYLRKFRGGNADTIWHETVQGGTYRLATGNTDAQEEFQITSAGNIRARVEVQSSSCGSGGQFRAVQGNFGVMHRNDGGNYYFLITNSGDPWGTWNGLRPFTISLTTGIVSMSSGVNISGGFNINGAAEFNNGLGCGTANGLGANAISLGDTDTGFVQEGDGILNAYANSQRIMRWTTGATANYKQLQVQGVNGPALLLNNTATNQSCYLLITLAGNNGAYFGFGGADDNVSVHNYRLNTTLQLRTSDLYMNRGLYVEGNVNANDVYIRSDIRLKSNLVELKDSLSKIEQLKGYIYDKQSKDADDIVYHRESGLIAQDVEKVLPEAVREDIDTGMLTISPSGINALLVNAINELRERLEAIENKLGA
Physico‐chemical
properties
protein length:738 AA
molecular weight: 78466,98430 Da
isoelectric point:5,79999
aromaticity:0,08266
hydropathy:-0,31667

Domains

Domains [InterPro]
DC_1159
STR
1–390
DC_1159 IPR048390 G3DSA:6.20.80.10 IPR051577 Coil
DC_1202
STR
338–738
DC_1202
IPR030392
CHP
641–736
IPR030392
IPR030392
CHP
641–699
IPR030392
YP_009831285.1
1 738
Architecture
STR
ATT
STR
STR 1-412 | ATT 413-474 | STR 475-738
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009831285.1
1 738
Domain Start End Length (AA) Confidence
N-terminal 1 466 466 0,1230
Central domain 467 665 200 0,1484
C-terminal 666 738 72 0,9974
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-466
Central
467-665
C-terminal
666-738

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_leB
[NCBI] 		1885242 Uroviricota > Caudoviricetes > Pantevenvirales > Pseudotevenvirus > Pseudotevenvirus leb
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009831285.1 [NCBI]
Genbank nucleotide accession
NC_048645 [NCBI]
CDS location
range 171175 -> 173391
strand +
CDS
ATGGCAGATTTAAAAGCGGGTACTACCGTTGGTGGTAATACTATCTGGAGTCAGGCTAACTTGCCTTTGCTCCCTTCTGGAAACACAATCACATATAAAGGCTTTAAAATCTACACCGAAAACGATAAGCCGACAAAGGCAGAAATCGGATTAGGCAACGTAACAAACGATGCACAGGTGAAGAAAGCTGGCGACGATATGACAGGCAACTTGACGTTAACGAACAATGCTTCATTAACTCTTCCTCGTCGCATTAACTTTGTTTCCGATAATTCATCGGCGGTGTATACTGTCGCAACGCGTTCAGATAACAACGCAGTTACAGATCCGTTTCCGTCATCGGAAACTCGCGTATACAGTTTATTAGTTAATACCAAATCGCATACAAGCGATCCTGCGGGTGGTGCTACTTTAGCCGCACATCTGTTTAACCAGAAAGCATCCGGTGCTGGTTCGATGTTTATACAGGTATTTGGCCCACCTAACAAGACAACAGGCGCTTCTGGTTCGGTGACCGGACAACTGTTGATGAACGGGGAAAATGGTCAACTGCAAATGACAGGTTCCGGTTTAACGATCGGGATGCAAACTGTTGTTAGCGGTACGATCTTTGGTACGCAAATGTCTATCAAGGGCGATTCGAACCGAAATCTGTTTTTCCAGGATGCTGGCGGTAATGAACTGAGTTTGATCTATGCTGATACAGGAAAGAACTTGTATGTTCGTACTGGTGGTGGTGCTTATGCAACTCGTTTTGCATCGGATGGAACTTTAGTTCTTGCTAACCATCTAACCGTTCCTGGACAGGCTACATTTAATGGTCTGGGTGTATTCAATAACCGTGCTTCTGTAGGCGTAGATTACGATTCACAAGGAACCAACTCAGCTATTCTTCGTGTTGATACAAGCGGTGATGGAAACGGGGTTGGTGATGGTGTTACCCACTTAGGCTATAAAGATGGTAACGGAAGATATAACCATTATTTCCGTGGTACTGGTTCAATTTATCTGACCAATAAATTAGGCACTATCTTTACATCGCAATCATATTATAATGATGTTCCCCAGGGCACACCAGCGCAATATTTCTTACCTACTGTTGGTCAGGGTGCGAAAAACTACTTACGTAAATTCCGTGGCGGTAATGCGGATACGATCTGGCATGAAACTGTTCAGGGCGGCACGTATCGTTTAGCAACAGGCAATACTGATGCACAGGAAGAATTTCAGATCACCAGCGCTGGTAACATTCGCGCCCGTGTTGAAGTACAGAGTTCTTCATGTGGTTCTGGTGGTCAGTTCCGCGCGGTTCAGGGTAACTTCGGTGTGATGCACCGAAATGATGGGGGTAACTATTACTTCCTGATTACTAACTCTGGCGATCCGTGGGGAACGTGGAACGGGTTACGCCCATTCACCATTAGCTTGACCACGGGTATTGTATCGATGTCCAGCGGTGTTAATATCTCCGGTGGTTTCAACATCAACGGTGCTGCTGAATTTAACAACGGTCTGGGTTGTGGTACTGCAAACGGATTGGGTGCAAACGCAATATCTCTGGGTGATACCGATACAGGTTTTGTTCAAGAAGGTGATGGTATTCTCAACGCCTATGCAAACAGCCAGCGTATTATGCGATGGACTACTGGTGCAACTGCTAACTATAAACAGTTACAGGTTCAGGGTGTTAACGGACCAGCATTACTTCTGAATAACACAGCGACTAACCAATCATGTTATTTGCTTATTACTTTGGCGGGGAACAACGGTGCGTACTTCGGGTTTGGTGGTGCTGATGATAACGTATCGGTACACAACTACCGACTGAATACAACCTTACAGTTGCGTACTTCGGATCTGTATATGAACCGTGGCCTGTATGTTGAAGGTAACGTAAACGCCAATGATGTGTATATTCGTTCTGATATTCGACTGAAATCTAATTTGGTTGAACTGAAAGATTCATTAAGCAAGATTGAACAGCTTAAAGGTTATATCTACGATAAGCAATCAAAAGATGCTGATGATATCGTATATCATCGTGAATCCGGTCTGATCGCTCAGGATGTTGAGAAGGTATTGCCGGAAGCAGTGCGCGAAGACATCGACACTGGTATGTTAACCATTTCACCTTCGGGAATTAACGCGCTTCTGGTTAACGCAATCAACGAACTGCGTGAACGTCTGGAAGCAATCGAAAACAAATTAGGGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c6d5a32dab6f47b6ef65ae4a9ac8bea9d55546ae75e5d1218787719712d61e7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6207
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50