Protein

View in Explore
Genbank accession
QPB09935.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAQTSYPFDNSVVNEAQYSSYFRELQDSGVVGSSNGTSLKVTAGTNMSLNVAIGSAIVRGHFYDNSAVQPVTIAAADTTARTDLVVLRLDPVANSILLTVIKGPVGGTAAPTQTAQGTFDLVLASVAVGASVTSISAANITDARTFVGSRIRSWTTATRPATADARVGMLGFNTTTTAWEFWNGTAWTGLVQAVDWSNLSNKPGTFPPSSHTHVWADTTDKPTTFPPSSHNHAWTEITGKPTTFAPSTHAHDWGSITGKPSTFAPASHSHSYLDYNDTIYRANGSDRPHSYGPTGSTWYAVWVDGNHNFCRNTSSIKFKENVRDIEIRPEDVLALRPRIYDRKPTLSEDGKPLERRVDEFGLIAEEVAETLPQVVNYLDGEVDGLRYDLLGVALIPVVQDQQARIESLEEKVTRLEKLVEGLAS
Physico‐chemical
properties
protein length:424 AA
molecular weight: 45917,42240 Da
isoelectric point:5,46941
aromaticity:0,08491
hydropathy:-0,27547

Domains

Domains [InterPro]
DC_1002
STR
1–333
DC_1002 Coil
IPR030392
CHP
314–412
IPR030392
IPR030392
CHP
314–375
IPR030392
DC_0942
RBD
315–424
DC_0942
QPB09935.1
1 424
Architecture
STR
RBD
STR 1-333 | RBD 334-424
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Sitrop
[NCBI] 		2767587 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptomyces sp.
[NCBI] 		1931 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPB09935.1 [NCBI]
Genbank nucleotide accession
MT701598.1 [NCBI]
CDS location
range 18564 -> 19838
strand +
CDS
GTGGCACAGACCTCCTACCCCTTCGACAACTCGGTCGTCAACGAGGCGCAGTACAGCTCCTACTTCCGCGAGCTCCAGGACTCGGGCGTCGTCGGCTCGTCCAACGGGACGTCCCTGAAGGTGACGGCTGGCACGAACATGAGCCTGAACGTCGCGATCGGTTCGGCCATCGTGCGTGGCCACTTCTACGACAACAGCGCCGTCCAGCCTGTGACCATCGCGGCTGCCGACACGACGGCCCGAACGGACCTGGTCGTCCTGCGGCTCGACCCTGTCGCGAACAGCATCCTCCTGACCGTCATCAAGGGTCCGGTTGGCGGCACTGCCGCTCCCACGCAGACCGCCCAGGGCACCTTCGACCTGGTTCTGGCCAGCGTCGCGGTCGGCGCGAGCGTCACCTCGATCTCGGCTGCCAACATCACGGACGCTCGAACCTTCGTCGGCAGTCGCATCCGCTCCTGGACGACCGCGACCCGACCGGCGACAGCCGATGCCCGTGTCGGCATGTTGGGCTTCAACACCACGACCACCGCCTGGGAGTTCTGGAACGGCACGGCGTGGACCGGCCTCGTCCAGGCGGTCGACTGGAGCAACCTGAGCAACAAGCCCGGCACGTTCCCGCCCTCGTCGCACACGCATGTCTGGGCCGACACCACGGACAAGCCGACCACGTTCCCTCCGAGCTCCCACAACCACGCCTGGACCGAGATCACCGGCAAGCCGACCACGTTCGCGCCGTCGACTCACGCCCATGACTGGGGCTCGATCACGGGCAAGCCGTCCACGTTCGCCCCGGCCTCGCACTCGCACAGCTACCTGGACTACAACGACACGATCTACCGAGCCAACGGCTCGGACCGTCCGCACAGCTACGGCCCGACCGGCTCGACCTGGTACGCGGTGTGGGTCGACGGCAACCACAACTTCTGCCGGAACACCTCCTCGATCAAGTTCAAGGAGAACGTCCGCGACATCGAGATCCGACCCGAGGATGTCCTCGCACTTCGCCCGCGCATCTACGACCGCAAGCCCACCCTCTCCGAGGACGGCAAGCCGCTGGAGCGGCGCGTGGACGAGTTCGGCCTCATCGCGGAGGAGGTCGCGGAGACCCTGCCCCAGGTCGTGAACTACCTGGACGGCGAGGTCGACGGCCTGCGCTACGACCTGCTCGGCGTCGCTCTCATCCCCGTCGTCCAGGACCAGCAGGCTCGCATCGAGTCGCTGGAGGAGAAGGTCACGCGCCTGGAGAAGCTGGTCGAGGGACTGGCTTCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
cf7d4820e7a3ef48282a30e017d6a871ed2e0813264414485f2edb18f40c5916
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8001
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Streptomyces phage Sitrop Portillo,V.H., Diaz,H., Clark,J.D., Hernandez,I., Liu,M. and Burrowes,B. 2021-01-07 — GenBank