Protein

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Genbank accession
XAN60318.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGYLQMTRNVESIFGAVVTAPHQIPYTYTATGGEKFISLPFYPVTGIVTINGGMQVPLDNFEIDGNTLNLGRALSKGDVVFCLFDKILSPEDYKTGIRIYKFQAIGGETEFTPDYTSYGVQSLYIGGEYKTPEIEYSYDRTTGKVSLQTALTAGVWVVAEMSVKQSNIGLLFDRSIQEIARAANVKDSEVILSTDTSQFLNGKKVVFSVSEQKAYGLPNLPTNVYIKSVSGGQLTYSPGNITVDLVPTPDSYENLSASNGAGEIGYDPAETYNKGTVGGMLEDLTDRTLSMDDFSGSDVGIQINAGLDFLRSQNTTYKIGGRLNLPRRQMSLDTPIVFDRVPAGEDDTGDEYLISGSGKGSTLLVAASGFPAGSAILNTNLPSGKYVQGFKLKDLGTKGGYNGLRVETASRTSIDNLRVSTATSDGVYIGNSWVNVYNQVLADQCTGNGVHFSITAQKTSTTTLAGYQLKNGGNGWRFGFMNYSAAITPASDQNAGHGYAIAKSEGFVMVAPGAESNKGAGIMVEASSSLGENRSIAIHGAFCHNNGSGTHANLLHAISAQNTINRVRIADSTAHASIGTTPDIIADGNETVVIVDNCVLPNGWQSRNGGYIDWVHHTLYTQKSGVSGPVAVCNLRSTQGHGNNSDSSTESFAGEVTIVASVNPPSTATRRVAIYKLLVCSGADTGKECELIKQLGYVSGNVAGTPSFTWSIGSSNELIATPIGSAAGTFYFEITTDSQVVALKR
Physico‐chemical
properties
protein length:745 AA
molecular weight: 79067,29480 Da
isoelectric point:5,29372
aromaticity:0,08456
hydropathy:-0,15208

Domains

Domains [InterPro]
DC_0063
STR
1–741
DC_0063
G3DSA:3.30.2020.50
ATT
164–249
G3DSA:3.30.2020.50
XAN60318.1
1 745
Architecture
STR
ATT
STR
STR 1-163 | ATT 164-249 | STR 250-741 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAN60318.1
1 745
Domain Start End Length (AA) Confidence
N-terminal 1 224 224 0,8566
Central domain 225 612 389 0,8639
C-terminal 613 745 132 0,9890
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-224
Central
225-612
C-terminal
613-745

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LHE287
[NCBI] 		3144838 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAN60318.1 [NCBI]
Genbank nucleotide accession
PP761450.1 [NCBI]
CDS location
range 137019 -> 139256
strand -
CDS
ATGGGGTATCTTCAAATGACCAGAAACGTCGAGAGCATCTTTGGAGCGGTCGTAACAGCTCCACACCAGATTCCATACACTTACACAGCAACGGGCGGAGAGAAGTTTATCTCCCTCCCTTTCTACCCTGTCACTGGTATAGTCACAATCAACGGTGGCATGCAAGTTCCGTTAGACAACTTTGAAATCGATGGAAATACGTTGAATCTCGGGCGTGCATTATCCAAAGGTGACGTTGTGTTCTGCCTGTTTGATAAGATTTTGTCTCCAGAAGATTATAAAACCGGGATTCGAATCTATAAGTTTCAGGCTATAGGAGGTGAAACCGAGTTCACTCCTGATTACACATCTTATGGAGTCCAATCTCTTTATATCGGTGGTGAGTACAAAACACCCGAAATTGAATATTCCTATGACAGAACGACAGGGAAAGTGTCTTTACAAACTGCGCTGACTGCAGGCGTTTGGGTAGTCGCTGAAATGTCTGTTAAACAATCGAATATCGGTCTGTTGTTTGACCGAAGTATTCAAGAAATCGCTCGTGCTGCTAACGTAAAAGACTCTGAAGTAATTCTCAGCACGGATACTTCTCAGTTTCTTAATGGTAAGAAGGTAGTATTCTCTGTTAGTGAGCAGAAGGCTTACGGTTTACCTAACCTACCTACTAACGTATATATTAAGTCTGTCTCAGGTGGTCAGTTAACCTACTCTCCGGGAAATATTACAGTAGACCTGGTTCCTACTCCGGATTCTTATGAGAATCTGTCTGCATCTAATGGTGCAGGTGAGATTGGGTATGACCCAGCAGAAACATACAATAAAGGAACTGTTGGGGGAATGCTGGAAGACCTCACTGACCGTACCTTGTCTATGGATGACTTTTCTGGTTCAGATGTGGGTATTCAGATTAACGCTGGATTAGATTTCCTCCGTTCGCAGAACACAACCTATAAAATAGGGGGGCGTCTCAATCTTCCACGTAGACAAATGTCTCTAGATACCCCAATAGTGTTTGACCGTGTTCCAGCAGGTGAAGATGATACAGGGGATGAATACTTAATCTCCGGTTCAGGTAAGGGTAGCACTCTTCTTGTTGCTGCTTCTGGTTTCCCAGCAGGAAGTGCAATCTTAAATACTAATCTACCAAGCGGTAAATATGTTCAAGGCTTCAAGCTAAAGGACTTAGGAACCAAAGGTGGATACAACGGGTTACGTGTTGAAACTGCTTCCCGTACATCAATTGATAACCTTAGAGTATCCACTGCTACATCGGATGGTGTGTATATAGGTAATAGCTGGGTTAACGTCTATAACCAAGTTCTTGCTGACCAATGTACTGGTAATGGTGTCCACTTCTCAATAACAGCACAGAAAACCAGCACTACAACCCTTGCAGGGTATCAGTTGAAGAACGGTGGCAATGGCTGGCGATTCGGATTTATGAACTACTCTGCTGCCATTACTCCAGCATCTGATCAGAATGCTGGGCATGGGTATGCTATTGCCAAGTCAGAAGGTTTTGTTATGGTTGCTCCCGGTGCTGAGAGTAATAAAGGTGCTGGCATTATGGTTGAAGCATCCTCCAGCTTGGGGGAAAACAGAAGTATTGCTATTCATGGAGCCTTCTGTCACAACAACGGTTCAGGTACTCATGCAAACCTGCTTCATGCAATTAGTGCACAGAATACTATCAACCGTGTTCGAATAGCGGATAGTACAGCCCACGCCAGTATTGGCACAACCCCAGATATTATTGCTGATGGTAATGAAACTGTAGTTATTGTAGATAACTGTGTTCTACCGAATGGTTGGCAATCTCGTAATGGTGGTTATATTGATTGGGTACACCATACACTTTATACACAGAAGTCTGGCGTATCAGGACCGGTAGCAGTATGTAACCTGAGAAGTACCCAGGGTCACGGTAATAATTCTGACTCAAGCACTGAGTCGTTTGCCGGTGAAGTAACTATAGTCGCCAGTGTTAACCCACCCTCTACAGCTACTCGTCGTGTTGCTATTTATAAACTACTAGTTTGTTCCGGTGCAGATACGGGCAAAGAGTGTGAGTTAATTAAGCAGCTTGGTTACGTGTCAGGTAATGTAGCAGGAACACCTAGCTTTACCTGGTCAATTGGTTCTTCCAACGAACTCATTGCTACCCCAATTGGCTCTGCTGCGGGTACATTCTATTTCGAAATTACTACTGATTCTCAGGTAGTAGCACTTAAGCGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4ba1acc3ca6427f5aaa414fe9054bcedbc0740bcf29cd3d098d605aafae3952
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7237
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Escherichia coli phage LHE287 Xu,S. 2017-10-19 — GenBank