Protein

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Genbank accession
YP_009875595.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MPVIIGTIASSFRLPVVGELVSSHRYWRLTFLDGDNFTYCSLAEVEMRAVADGPSIATGGTAFGTNDRGGSWVKANAFDGNANSFFSTTEDYPVYLGYDFGTNVEVVEIMIKARPTFNDHTPTVFRLEASDDMENWAFMGIGSIESDWTAAQELVCTVAPPDFDTTHQRVGYSLGTTSNILNGNLSKAYAANTLTHIVGRTGNSGVDWEGRVFRATSKGMIKSQVATFSHTNTSSGEFIDMALSSPVAVKKGEHIVTLFRRSDDPSQGSRLNFMRDGNTPAIYENIGDGWNVTSDNWPSAGDVSDSDTNESSSDGHLINFIGTYEREPTKRDYLGKTVVLVIMGQSNAVGRATDTLSSDTTTTANVLTCNSSHALIDAVEPLPTTNSNENSGQMGYGYGVAREFLTRHSPARVIVINLAVGGAGFLNGDWNPSNGPVYDSAKARWEACWSTITSTYPGAEIGSIIWTQGEDEVQDYTTLFDGTDDDHRYAAMVMGLFETVRRSWTGFDQDVPIVVTPIPGSSNYTNQPAANSNIQTGIGTIAQSMKYAALVDMSGVTETYKDAGHWDGDTYRQMFVPIVDAIDATLFNNWTYEKTSDWTQVSGVKIGLDARGLAEGATITNVSSEFPEFDNKRVFVDTNSRMNFDGQAELRWRDNGKPRLGTNDFSIRLSFESTSSVEQGLIADYQTTGNKRSWVLRRSSTSTLQFYVSNNGTSADLALEHSISSNTTYKVEVKRTGTLLELYVDDVVVDTHTLASGYDFFDTGDDSPLLIGDHINGRELVGYLDYVFLELL
Physico‐chemical
properties
protein length:792 AA
molecular weight: 86574,41110 Da
isoelectric point:4,59790
aromaticity:0,10101
hydropathy:-0,31414

Domains

Domains [InterPro]
G3DSA:2.60.120.260
STR
57–192
G3DSA:2.60.120.260 IPR052940 IPR013320
G3DSA:2.60.120.260
STR
57–190
G3DSA:2.60.120.260 IPR036514 G3DSA:2.60.120.200
IPR008979
STR
67–139
IPR008979 IPR036514
IPR000421
RBD
68–138
IPR000421 SSF52266
IPR005181
ENZ
339–573
IPR005181
YP_009875595.1
1 792
Architecture
STR
STR
STR
STR 57-192 | STR 335-589 | STR 642-789 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage RD-1410W1-01
[NCBI] 		1815984 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Roseobacter denitrificans
[NCBI] 		2434 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009875595.1 [NCBI]
Genbank nucleotide accession
NC_049372.1 [NCBI]
CDS location
range 24535 -> 26913
strand +
CDS
ATGCCAGTAATCATCGGAACCATCGCAAGTTCATTCCGTTTGCCAGTGGTGGGGGAACTCGTTTCTTCCCACCGTTACTGGCGTTTGACTTTCCTTGATGGAGATAACTTTACCTATTGTTCTCTGGCAGAAGTTGAGATGCGTGCTGTAGCAGATGGACCTTCTATCGCTACTGGAGGTACTGCATTTGGTACGAATGATCGTGGTGGATCTTGGGTCAAAGCCAATGCTTTCGATGGAAATGCCAACAGTTTTTTCTCCACCACTGAAGATTACCCTGTGTATCTTGGTTATGATTTTGGGACTAATGTGGAAGTCGTTGAAATCATGATTAAAGCTCGTCCTACATTCAATGACCACACTCCCACAGTATTCCGTCTGGAAGCCTCTGATGACATGGAAAACTGGGCCTTTATGGGTATTGGTTCCATTGAATCTGATTGGACTGCTGCTCAAGAATTGGTGTGTACTGTTGCTCCTCCTGATTTTGATACCACACATCAACGTGTTGGTTACTCTCTTGGTACAACTTCCAACATTCTCAACGGAAACCTATCCAAAGCATATGCTGCAAATACTCTTACCCATATAGTAGGCCGTACTGGTAACAGTGGGGTCGATTGGGAAGGTCGAGTATTTCGAGCCACTTCGAAAGGTATGATTAAATCTCAGGTAGCCACATTTTCTCACACGAATACTTCTTCAGGTGAGTTTATTGACATGGCACTTTCTTCCCCTGTTGCAGTGAAAAAAGGTGAACACATTGTCACTTTGTTCCGTCGATCTGATGATCCTTCTCAGGGATCTCGATTGAACTTCATGCGAGATGGTAACACCCCTGCCATTTACGAGAACATCGGTGACGGATGGAATGTCACCTCTGATAACTGGCCATCAGCAGGAGATGTATCAGACAGTGATACCAATGAATCAAGTTCTGATGGTCATCTGATCAACTTCATTGGTACTTATGAACGTGAACCAACCAAACGAGACTATTTAGGAAAGACTGTGGTCTTGGTTATCATGGGTCAGTCAAACGCTGTGGGGCGTGCCACAGACACTCTCTCGTCTGATACAACCACAACTGCCAACGTCCTCACCTGTAACTCCTCTCACGCTCTCATTGACGCTGTGGAGCCTCTTCCTACGACCAACTCGAATGAGAATTCTGGTCAGATGGGGTATGGTTATGGTGTGGCCCGTGAATTCCTCACCCGTCACTCTCCTGCTCGGGTCATCGTCATCAACCTTGCTGTTGGTGGTGCAGGTTTCCTGAATGGTGATTGGAACCCTTCCAATGGTCCAGTCTATGACTCTGCAAAAGCTCGTTGGGAAGCCTGCTGGTCTACAATTACTTCCACCTATCCCGGTGCTGAGATTGGATCAATCATCTGGACTCAAGGTGAGGATGAAGTCCAAGACTATACCACCTTGTTTGATGGTACTGATGATGATCATCGTTATGCTGCTATGGTGATGGGACTCTTCGAAACTGTACGTCGTTCTTGGACTGGCTTCGATCAAGATGTCCCTATTGTTGTGACTCCGATTCCCGGATCTTCCAACTACACAAACCAACCTGCAGCAAACTCCAATATCCAAACAGGTATTGGCACCATCGCTCAGTCGATGAAGTATGCTGCTTTGGTGGATATGTCAGGTGTGACAGAGACTTACAAAGATGCTGGTCACTGGGACGGGGATACCTATCGTCAGATGTTTGTTCCTATCGTGGATGCCATTGATGCAACCCTGTTCAACAACTGGACCTACGAGAAAACCTCTGACTGGACACAGGTATCTGGGGTCAAGATTGGTCTTGATGCTCGTGGTTTGGCTGAAGGTGCAACCATCACAAACGTGAGTTCTGAATTCCCTGAGTTCGACAACAAACGAGTATTTGTGGACACCAACAGCCGTATGAATTTTGATGGACAAGCTGAACTTCGGTGGAGAGACAACGGGAAACCTCGTCTCGGAACCAATGATTTCAGTATCCGTCTGAGCTTTGAGTCCACATCCTCTGTAGAACAGGGTTTGATTGCTGATTACCAGACCACAGGAAACAAACGGTCTTGGGTTCTTCGTCGTTCAAGCACTTCGACTCTTCAGTTTTATGTATCAAACAATGGTACATCTGCTGATTTGGCTCTGGAACACTCCATCTCTTCAAACACCACCTACAAAGTAGAGGTGAAACGTACCGGGACTCTTCTCGAATTGTACGTTGATGATGTGGTTGTTGATACTCACACTCTTGCAAGTGGGTACGATTTCTTCGACACAGGTGATGATTCACCTCTCCTCATTGGAGATCACATCAATGGAAGAGAACTGGTCGGATACCTCGACTATGTTTTCCTCGAATTACTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
aec37952819d986fdef3b1e39f7796974da8e11a337b836d290d1984acd2d244
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7083
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50