Protein

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Genbank accession
CAB4128073.1 [GenBank]
Protein name
LpxD UDP-3-O-[3-hydroxymyristoyl]
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAICKTALIHEDAKIGSNVTIGAYAVIGNCEIGDGCIIHPHVFIGDCVSIGNGAEIFNGAVIGKEPKGAGAIARKIEFKKTIIIGDETTISPHAIIYYDVIIGKKCLIGDGASIREDCLIGNNCLISRYVTINYNVKVGNNVKIMDMSHITGNTIIEDNVFISTLVGTANDNKITEGYGDHVLGQYISDSAIIGLGANILPGIKIGAKSIIGAGALVTKDIPNNQLVKGIPAK
Physico‐chemical
properties
protein length:233 AA
molecular weight: 24402,04590 Da
isoelectric point:6,28886
aromaticity:0,04721
hydropathy:0,31545

Domains

Domains [InterPro]
G3DSA:2.160.10.10
STR
1–68
G3DSA:2.160.10.10 G3DSA:2.160.10.10
IPR011004
STR
3–233
IPR011004
IPR001451
STR
12–45
IPR001451 IPR056729 IPR001451
IPR050179
Unmapped
112–233
IPR050179
IPR018357
Unmapped
193–221
IPR018357
CAB4128073.1
1 233
Architecture
STR
STR 1-233
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAB4128073.1
1 233
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0010
Central domain 11 209 200 0,6102
C-terminal 210 233 23 0,9900
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-233

Taxonomy

  Name Taxonomy ID Lineage
Phage uncultured Caudovirales phage
[NCBI] 		2100421 Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAB4128073.1 [NCBI]
Genbank nucleotide accession
LR796229 [NCBI]
CDS location
range 6147 -> 6848
strand +
CDS
ATGGCTATTTGTAAAACAGCATTGATTCACGAAGATGCTAAGATAGGAAGTAATGTAACAATTGGTGCTTATGCAGTCATCGGTAATTGTGAGATTGGTGATGGCTGCATAATTCATCCACACGTTTTCATCGGAGATTGTGTTTCAATTGGGAATGGAGCAGAAATATTCAATGGAGCTGTTATCGGCAAAGAGCCTAAAGGGGCTGGAGCTATTGCCCGAAAAATTGAATTTAAAAAAACAATAATCATTGGTGATGAAACTACTATAAGCCCGCATGCAATTATTTATTATGACGTCATTATCGGAAAAAAGTGTTTAATTGGGGATGGGGCCTCAATACGTGAAGATTGCTTAATAGGGAATAATTGTCTTATAAGTCGGTATGTTACTATTAATTACAATGTAAAAGTTGGGAATAATGTTAAAATTATGGACATGTCCCATATTACAGGAAATACTATTATTGAAGATAATGTGTTTATTAGCACACTAGTGGGAACTGCTAATGATAATAAAATTACTGAAGGATATGGCGATCATGTATTAGGTCAATATATTAGTGATAGTGCGATAATTGGATTGGGTGCAAATATATTACCAGGAATAAAAATAGGTGCCAAATCAATAATAGGAGCCGGGGCCTTAGTTACAAAAGATATTCCTAATAACCAACTTGTTAAAGGAATCCCTGCAAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d99994883a48e812c1429eded32ec906d3a7a3a9897229a860515d4fe5e0af22
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9455
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50