Protein

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Genbank accession
QCS36780.1 [GenBank]
Protein name
major capsid protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNTQLSEKLGANNSIFDVKEQPSIRLSAFNFSRKHNTTLDIGGIYPVDFFSVYPNDKVDLKLRYMLDTLPLAVPPMTNYKVRTHWYFVKKSALWAGWNTFITGGRTGLDLKIPSLLNSFWGRTYSDISDFADAGIGEVTTSSLSGLPAYLGIPPRFGLNVSDGGHYLPFVRVSSTPENPTGVSARLNALPFMAYLKIFRHAYLPANLIQDNKFWFPDNLDDHWRINYDASNLLHLGLFSGNGSPTEPSYSIVPKSTDNCADLTCLRYAPFDMDYFTSSKPWLVRGGTETSLSSDIDISGLQIESAPGVSFVSLRAGPFMSAPSGVSKYLIQDGSGVCMTGPSAGTVSGSQTELGVYSDSISGALTLSGTASTSLSLTANTLRNLIAVSVWQERNALTNGNYNLLVQSHWGIKPREPDYEPLYIGGTSDYVQFSNVIQTSQTAGRQVLGQSASIGGATSGADVFSYKANDYGYIFGVMIISPEVSYSQGTSREFSDLNLEDQFTPEFASLGYQPILKQELFTSTNGTVNDSLFGYQTRFAYLKQRLNRISGLLAVSPDQDIMFSAYNQTRWFNNSPSLSLEFCTMAPYNIRRDFMAFPEYPLFRAQIASDVKLIRALPYQSSPNTFGF
Physico‐chemical
properties
protein length:627 AA
molecular weight: 69098,83200 Da
isoelectric point:5,60696
aromaticity:0,12440
hydropathy:-0,16810

Domains

Domains [InterPro]
IPR037002
ATT
19–300
IPR037002 IPR037002
IPR016184
Unmapped
21–114
IPR016184 IPR016184
IPR003514
STR
24–130
IPR003514 IPR003514
QCS36780.1
1 627
Architecture
ATT
STR
ATT
ATT 19-300 | STR 301-346 | ATT 347-622 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QCS36780.1
1 627
Domain Start End Length (AA) Confidence
N-terminal 1 241 241 0,8703
Central domain 242 440 200 0,0402
C-terminal 441 627 186 0,5999
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-241
Central
242-440
C-terminal
441-627

Taxonomy

  Name Taxonomy ID Lineage
Phage Tortoise microvirus 5
[NCBI] 		2583154 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QCS36780.1 [NCBI]
Genbank nucleotide accession
MK765555 [NCBI]
CDS location
range 1 -> 1884
strand +
CDS
ATGAATACACAACTTTCCGAGAAACTTGGTGCTAATAACTCGATTTTTGATGTAAAAGAACAACCTAGTATAAGGCTTTCTGCTTTTAATTTTTCAAGGAAGCATAATACTACGCTTGATATTGGTGGCATTTATCCTGTTGATTTCTTTTCAGTTTATCCTAATGATAAGGTTGATCTTAAACTTCGGTATATGCTTGATACACTTCCTTTAGCTGTTCCTCCTATGACTAATTATAAGGTACGTACACATTGGTATTTTGTGAAAAAATCTGCGCTTTGGGCTGGTTGGAATACTTTTATTACTGGTGGCCGTACTGGTTTGGATTTAAAAATCCCGTCTTTATTGAATAGTTTCTGGGGACGAACTTATTCTGATATTTCTGATTTTGCTGATGCAGGTATTGGTGAGGTGACGACTAGTTCGTTGAGTGGTTTGCCGGCTTATCTTGGTATACCTCCGCGTTTCGGTTTGAATGTTTCTGATGGAGGACATTACTTGCCTTTTGTCCGTGTATCATCTACACCTGAAAACCCCACTGGAGTTTCTGCGAGGTTAAATGCTTTGCCGTTTATGGCTTATTTGAAAATTTTTAGGCATGCTTATCTTCCAGCGAATTTAATTCAGGATAATAAGTTCTGGTTCCCTGATAACCTCGATGATCATTGGCGTATTAATTATGATGCTTCCAATCTTCTTCATTTAGGACTTTTTTCAGGAAATGGCTCTCCTACAGAGCCTAGCTATTCAATTGTACCTAAAAGCACTGATAACTGTGCTGATTTGACTTGTCTACGTTATGCACCCTTTGATATGGACTATTTTACGAGTTCTAAACCTTGGTTGGTTCGTGGTGGCACTGAGACTTCTCTTAGTAGTGACATTGATATTTCTGGCCTACAGATTGAGAGTGCTCCTGGCGTGAGTTTTGTTTCGCTTAGAGCGGGCCCTTTTATGTCAGCGCCCTCTGGTGTGTCTAAGTATTTGATTCAAGATGGTAGTGGCGTGTGTATGACTGGGCCAAGTGCAGGTACTGTATCTGGTTCTCAGACTGAACTTGGTGTATATTCGGATTCTATTTCTGGTGCCTTGACTCTTTCCGGTACAGCATCTACTAGCCTATCACTTACGGCTAATACTTTGCGAAACCTGATAGCTGTTTCTGTTTGGCAAGAACGTAACGCGTTGACTAATGGTAATTATAATCTTTTGGTACAGTCCCATTGGGGAATAAAACCTCGTGAGCCTGATTATGAACCGCTTTATATTGGCGGAACCTCTGATTATGTCCAATTTTCTAATGTTATACAGACTTCTCAGACTGCTGGACGTCAAGTTTTAGGTCAGTCAGCTTCCATTGGTGGTGCAACTTCTGGTGCAGACGTTTTTAGTTATAAGGCGAATGATTATGGTTATATCTTTGGAGTGATGATAATTTCTCCGGAAGTTTCATATTCTCAAGGTACTTCACGAGAGTTTTCTGATTTGAATCTTGAAGATCAGTTTACCCCCGAGTTTGCTTCTTTAGGATATCAACCTATTTTGAAGCAAGAGCTTTTTACAAGTACTAATGGTACTGTTAATGATTCTCTTTTTGGGTATCAGACTAGATTTGCTTATTTGAAGCAACGTTTGAATAGAATTTCTGGTCTTTTAGCAGTCTCTCCTGATCAAGATATAATGTTTTCAGCATATAATCAGACTCGCTGGTTTAATAATTCGCCGTCTCTTTCTCTTGAATTTTGTACTATGGCTCCTTATAACATACGTAGAGATTTTATGGCTTTCCCCGAGTATCCTCTCTTCCGAGCTCAGATTGCTAGTGATGTTAAGCTTATTCGTGCATTGCCGTATCAATCATCGCCCAATACTTTTGGTTTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0702f3b30b69f6f42668489360835c4950380cb0c33578338dac0251a98c31e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5098
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Microviruses associated with Mojave and Sonoran Desert tortoises Orton,J., Morales,M., Dolby,G.A., Schmidlin,K., Fontenele,R.S., Kraberger,S., Webster,T., Wilson,M., Kusumi,K. and Varsani,A. 2022-01-02 — GenBank