Protein

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Genbank accession
WYV70521.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSPYHTAFRNGLYTGQNENLFRQLELDLRKAIRKVNGVSPDENGNITLPVGGSSELSSLEDVNLTGMMDKDILTYDSLLGKWVPAPNQGKASSYILELNKWGISNTGTKAAETTTGINSALDWASKNGFTDVVFPKGMYLISKDSAVRPVDYLTLDLNGATLKKEPNNLQTYSVISFKHNQKYVTVKNGKIVGDKDLHDFSSGGTHEGGYGIELGSFSPPADGGNNLRYIFLENLEISDFTGDSITLNSSFGQILPAPTTLASSWEQGTVSNTDGTLSASTSKIRSTIKIDMTQPLITKYKYFGLYGNGYGGLGSDIKCDYYDVIFYKSNDAFISSAKAVQFFDEVEVPTGASYARVVLHQSTVPVAANCTINIRVPTFAQYVYISKCDLHHNRRQGISVCGAKNIYIDGNQIHHISGVDPQSGIDIEDGYDLNQMIHVNKNFFYNNEKYNLIVVNGKNVFVTDNVLYPPTNSGYVSLAINGGADKVVATGNVIKFSKVTLFGEVLFANNYMYGCQVTSTVAYATKQTKIVGCTFHNCKYVSDNPFPFSVTVDDCSFFNDADKLNSLSTTIQWTLEVKQEPQAFVNCVFQGKDVNYLTYVGSAATFKQGWIFQNCKFKNTKDTGLLSGSYVNCDFTELSTFMNISRNTDGSNSLELINCNFSSTDGNNALLTITQLKSFIMKGCKVDKTSGYVLTVQNVSDEVFITDNIIKQTNDALPRAMVTVEAAFTGNTIIMKDNYFRAKNNSQVAINDLTTNTPAFVIQNNVLNKATITSSSTLKSNNIVNGVLQ
Physico‐chemical
properties
protein length:790 AA
molecular weight: 86616,33380 Da
isoelectric point:5,94220
aromaticity:0,10253
hydropathy:-0,21456

Domains

Domains [InterPro]
DC_0540
ATT
1–106
DC_0540 IPR012334 IPR006626
IPR011050
STR
108–548
IPR011050 DC_1830
IPR006626
Unmapped
182–217
IPR006626 IPR006626 IPR039448 IPR006626
IPR006626
Unmapped
381–403
IPR006626 IPR006626 IPR006626
WYV70521.1
1 790
Architecture
ATT
STR
RBD
ATT 1-106 | STR 107-560 | RBD 561-790
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYV70521.1
1 790
Domain Start End Length (AA) Confidence
N-terminal 1 110 110 0,9900
Central domain 111 779 670 0,9955
C-terminal 780 790 10 0,2959
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-110
Central
111-779
C-terminal
780-790

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Vp4
[NCBI] 		2952612 Viruses > unclassified bacterial viruses >
Host Bacillus thuringiensis
[NCBI] 		1428 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYV70521.1 [NCBI]
Genbank nucleotide accession
PP554273.1 [NCBI]
CDS location
range 1 -> 2373
strand +
CDS
ATGTCAAGTCCTTATCATACTGCATTTAGAAATGGTTTGTACACAGGACAGAACGAAAATCTTTTTAGACAACTAGAGCTAGACTTACGAAAAGCAATAAGAAAAGTAAATGGTGTTTCCCCGGATGAAAATGGAAATATTACTTTGCCTGTTGGTGGAAGTTCCGAATTATCTTCTTTAGAAGATGTTAACTTAACTGGGATGATGGATAAAGATATCCTTACATATGATTCCCTGTTAGGTAAATGGGTACCTGCACCGAATCAAGGTAAAGCTTCATCATACATACTAGAGTTAAATAAGTGGGGTATCAGTAATACAGGTACTAAAGCAGCAGAAACGACTACAGGAATTAATAGCGCATTAGATTGGGCTAGTAAGAATGGATTCACAGATGTAGTATTCCCTAAAGGTATGTATCTTATCAGCAAAGATAGCGCTGTAAGACCTGTTGACTATTTAACGCTAGATTTAAATGGAGCTACACTTAAAAAAGAACCGAACAATCTTCAAACATATAGTGTAATTAGCTTCAAACACAACCAGAAGTATGTAACAGTCAAGAACGGTAAAATAGTCGGTGACAAAGATTTACACGATTTTAGCAGCGGCGGTACGCATGAAGGTGGTTACGGAATTGAACTAGGTAGCTTCTCTCCTCCAGCAGATGGCGGCAACAACTTACGTTATATATTTTTAGAAAACTTAGAAATATCTGATTTCACTGGTGACTCTATTACATTAAACAGTTCCTTCGGTCAGATACTTCCAGCACCTACTACTTTAGCATCATCATGGGAACAAGGTACTGTAAGTAATACAGACGGTACTCTCTCCGCTAGTACATCTAAGATTCGCTCTACAATAAAGATTGACATGACACAACCACTTATTACAAAATATAAATATTTCGGTTTATACGGAAATGGATATGGAGGATTAGGCTCTGATATCAAATGCGATTACTACGATGTAATATTCTACAAGTCCAATGACGCGTTTATATCTTCTGCTAAAGCTGTGCAATTCTTCGATGAAGTAGAAGTTCCAACCGGGGCAAGTTACGCACGAGTAGTTTTACACCAATCTACCGTTCCAGTAGCAGCTAACTGTACAATAAATATTCGCGTTCCTACTTTCGCACAGTATGTATACATAAGTAAATGCGACTTGCATCATAATAGAAGACAAGGTATATCTGTATGTGGAGCAAAAAATATCTATATCGATGGGAACCAGATACATCACATCTCTGGAGTAGACCCACAATCCGGGATAGATATAGAAGATGGATACGATTTAAACCAGATGATTCACGTTAATAAAAACTTCTTCTATAACAACGAGAAGTACAATCTTATCGTGGTTAATGGTAAAAATGTATTTGTCACAGACAATGTTCTATACCCACCTACAAATAGCGGATATGTAAGTTTAGCTATAAATGGTGGAGCAGATAAAGTAGTAGCTACAGGTAACGTAATCAAGTTTAGTAAGGTTACTTTATTCGGAGAAGTGCTGTTTGCTAATAACTACATGTACGGATGTCAAGTAACATCTACAGTAGCATACGCAACAAAGCAAACAAAGATAGTAGGATGTACATTCCATAACTGTAAATATGTGTCGGATAACCCGTTCCCATTCTCTGTTACTGTGGATGACTGCTCGTTCTTCAATGATGCAGATAAGCTAAACTCATTATCTACTACTATCCAATGGACTCTAGAAGTGAAGCAAGAACCGCAAGCATTCGTTAACTGTGTATTTCAAGGTAAAGATGTTAACTACCTAACTTATGTAGGTAGTGCAGCTACATTTAAACAAGGATGGATATTCCAAAACTGTAAGTTTAAAAACACAAAAGACACAGGATTATTGAGTGGTTCTTACGTAAACTGCGATTTCACTGAACTAAGTACATTCATGAATATATCCAGAAATACAGATGGTTCAAACTCATTAGAGTTAATTAACTGTAACTTCTCTTCTACAGATGGTAACAACGCTCTACTAACAATTACACAATTGAAATCTTTCATCATGAAAGGTTGTAAAGTAGACAAGACTAGTGGATATGTTCTAACAGTACAAAATGTCAGTGACGAAGTATTTATAACAGATAACATCATTAAACAAACGAACGACGCATTACCTAGAGCTATGGTAACTGTAGAAGCAGCTTTCACAGGAAATACTATCATCATGAAGGATAACTATTTCCGAGCGAAGAACAATTCGCAGGTTGCGATAAATGATTTAACTACAAATACACCTGCTTTTGTAATACAAAATAACGTTCTAAACAAGGCTACTATCACTAGTTCTAGCACATTAAAATCTAACAATATAGTGAACGGAGTCCTGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d48ed5c6ba352e26dfa9a6a2e1f7b41d1fc0d6836742fefef9dfb5b94b66c70
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7822
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Deciphering the adsorption machinery of Deep-Blue and Vp4, two myophages targeting the Bacillus cereus group Nuytten,M., Leprince,A., Gillis,A. and Mahillon,J. 2024-09-17 — GenBank