Protein

View in Explore
Genbank accession
QBX32537.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,74
Protein sequence
MFEILLSTGARERTPYVPFYMRTKKVADLPVGIAGPIVAMDNDNLYVVGGQDSTGAIRSATEIFKLSDMSMTVGGNHARTISINGATIYNNRMLIPGGQFSTNLAGLLSTTGALNLPGLTSAVELTGRLPQTSYGNAVCQHRGDIYVLPSYKAGFYKLNPLTGATLENYPGLPSFDDVGGGILAGMSIFGHGDYIYCLGGWANNQNLRIHRFNLISKQWELWQTMDPAYHHVWHGGFIDDEGYYNYTGWGNLGQGNKIYLHRYNPVKKSWARSSDTGLSYRNMSGVIGLKDDIYIVGGTSEPFSTNWTSTTNKIKEIYKVSRAPENWEPVPEKTWVRKADMPGGRVQAAVASTYSELFVMFGSDGAVKNTNLIYDVFTDTWKEGPVKPPARYQSAATTVADQILIFSGSNYSPDLYSYNHLEDKWSDSISEPNAPTWRTNHCMTSFGRYAYLFGDDGRTDRAIYRYSLDAAAGSKWYKLPQLAPEGLARAAMVIVNNKLYIACGWISSNTMTKTIRVLDLVAGTWSTISNVPASFVARVGCLLAAIDNKLYIGGGASPSTGLNDFWEYDTVSGAWTRLPDIPINGDAAMMAACADTLYIAGGNRPNGVKGNELYAYRP
Physico‐chemical
properties
protein length:618 AA
molecular weight: 67772,70170 Da
isoelectric point:7,12650
aromaticity:0,11650
hydropathy:-0,23236

Domains

Domains [InterPro]
IPR015915
STR
16–153
IPR015915 IPR015915 IPR011043
IPR015915
STR
24–205
IPR015915 PTHR24412 IPR006652
IPR015915
STR
25–205
IPR015915 IPR015915 IPR015915
IPR006652
STR
44–91
IPR006652 IPR015915 IPR011043
PF24681
STR
354–555
PF24681
IPR006652
STR
356–401
IPR006652 IPR006652
QBX32537.1
1 618
Architecture
STR
STR 16-618
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX32537.1
1 618
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,9134
Central domain 17 368 353 0,9148
C-terminal 369 618 249 0,1288
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-368
C-terminal
369-618

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PA1C
[NCBI] 		2562177 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX32537.1 [NCBI]
Genbank nucleotide accession
MK599315 [NCBI]
CDS location
range 293325 -> 295181
strand -
CDS
ATGTTCGAGATATTACTCAGTACTGGTGCAAGGGAGAGGACTCCTTATGTACCCTTTTATATGCGAACCAAGAAGGTAGCTGACCTTCCAGTGGGTATTGCAGGTCCAATCGTTGCGATGGATAACGATAACTTATATGTAGTTGGTGGTCAAGATTCTACTGGGGCTATCCGCTCTGCAACTGAAATATTTAAACTGTCCGATATGTCGATGACTGTTGGTGGAAACCATGCTAGAACTATTTCCATCAATGGAGCAACTATTTATAATAATAGAATGCTAATACCAGGCGGCCAATTTTCTACTAATTTAGCTGGTCTTTTATCAACGACAGGTGCATTGAATTTACCTGGGTTAACTAGTGCAGTTGAGTTAACAGGACGTTTACCACAGACGTCGTATGGGAATGCTGTATGTCAACATAGAGGGGACATATATGTTTTACCCAGTTATAAAGCCGGATTCTATAAATTAAATCCACTTACTGGCGCGACTCTTGAAAATTATCCAGGATTACCAAGTTTTGATGATGTCGGTGGTGGGATATTAGCAGGTATGTCAATTTTTGGACATGGTGATTATATCTATTGTTTGGGTGGATGGGCAAATAATCAGAACCTAAGAATACATCGATTTAATCTTATTTCCAAACAATGGGAATTATGGCAGACAATGGACCCTGCATATCACCATGTATGGCATGGTGGTTTTATTGATGATGAAGGTTACTATAACTATACAGGCTGGGGTAACCTCGGTCAAGGTAACAAAATATACCTCCATCGTTATAATCCAGTCAAAAAATCTTGGGCACGCTCATCGGATACCGGATTATCATATCGAAACATGTCGGGTGTTATTGGACTAAAAGATGATATTTATATTGTCGGTGGTACATCTGAACCATTCTCTACTAACTGGACTAGCACAACAAATAAAATAAAAGAAATCTACAAGGTATCACGTGCTCCCGAAAACTGGGAACCTGTCCCAGAGAAAACATGGGTAAGAAAAGCAGACATGCCTGGCGGTAGGGTACAAGCAGCCGTAGCAAGTACTTATTCAGAACTGTTTGTTATGTTTGGTAGTGATGGTGCAGTAAAGAATACAAACTTGATTTACGATGTATTTACAGATACGTGGAAAGAAGGACCAGTTAAACCTCCTGCACGTTATCAATCGGCAGCCACAACTGTCGCTGACCAGATTCTTATTTTCTCTGGTAGTAACTATTCTCCAGATCTGTATTCTTATAACCATCTAGAAGACAAGTGGAGTGACAGTATATCTGAACCAAACGCACCCACATGGCGAACAAACCACTGCATGACATCTTTTGGTAGATATGCCTATCTTTTTGGTGATGATGGACGCACCGATAGAGCTATTTATCGTTATAGTTTAGATGCTGCGGCTGGAAGCAAATGGTATAAATTACCCCAACTTGCTCCAGAAGGATTGGCTAGAGCGGCAATGGTTATTGTGAATAATAAACTTTACATTGCCTGTGGTTGGATTAGTTCTAACACCATGACTAAAACCATTCGTGTTCTTGATTTGGTCGCTGGTACATGGTCTACCATATCTAACGTACCCGCCAGCTTTGTTGCTCGTGTAGGTTGTCTATTAGCTGCGATTGATAATAAACTTTATATAGGTGGCGGCGCTAGTCCAAGCACTGGATTGAATGATTTCTGGGAATATGATACAGTCAGTGGTGCGTGGACAAGACTCCCCGACATTCCTATAAACGGCGATGCTGCTATGATGGCTGCATGTGCTGATACCTTATATATCGCTGGCGGTAATAGACCAAACGGTGTGAAAGGTAATGAGCTCTACGCATATAGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c8f97a15b9cbaa6528a567cab336619f591c1df18f613d5e899fabbe63c2bd5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8740
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage therapy of healthcare-associated infections Kiseleva,I.A., Aleshkin,A.A., Rubalskii,E.O., Zulkarneev,E.R., Bochkareva,S.S. and Efimova,O.G. 2017 — GenBank