Protein

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Genbank accession
YP_010843755.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MADFNFSSAPYHNRFNALNDWTLALFQPDRPLQQSELNEMQSILHYYLKSVGDAVFSDGNMQTGMEFVLDNSGNLTVGDGQVYVEGKVRNFKKQTIKLNKIGREFVGVKVEQSIITADQDSSLLDQTAGVPSAFSKGADRLKETVVLTLDDPQSATIYQFDNGKLFVSSDNPEMTKINEILAERTYDESGSYRVNGFNMWTEPHPTDTSKIQLVIDTGRAYVLGYKVDKPTSTRIPLDKARDTRSVANEGQYYDTAVNRIKLGNSPVETVTRVTGQVQVPKEQVSRGSQSGGTDFLSRTSVFQIDRVWTENPTSGEVIKEYTQGTDFQLINGQAVSWAPNGAEPTAGATYYVSYRYNKSMVLNTDYKITIEGTGDTKTWYIDFSDMTGSKPIQQSLVNVDYNYYLARKDLIVLDRYGEVTVHKGQPDNLRLAEAPAQVDPSTLQIGVVTIYPESETASAMSFSVTRLSMADLQKMRTRIDNIEYNEAVNALDNPAMAGENPVTLRSVFSDGFISLDKYDSTHPDAIIAFSFEDAEITLPYQEVNKVVPKMLENASEAYVWGRLVSAPFTEEKTISQPFASEAMNVNPYNVFNKQGVITLTPSADNWIEEERVTVTQDEVKSYTVNRWWLHGGNYYSDEARYLHNNLALDAGQSWSGTPSQNKQVTGTTLTAGGQQTLESMIEFMRQIDIVVEGKNYLPNANNLYALFDGVRVPITPASGYRKGTDTGTLMANADGTVKGTITIPAGIRCGVREVTLRNADNLGISTFTAQGRKKTVQDIIIRTHVTANLYDPLAQSFQFTDDRVITSLGLHFASKDAGENNVIVQIRGMSDGGQPNKTIYAERVLTPAQVNVSADSSKETKVTFDDPIMCKAGQEYCIVIVTDSDSYTMWLGTRGKPRIDSPSDLITSNPYVQGVLFSSSNASTWTAHQDSDLKFNVYTAKFNEQAVLEFDTMKNVKVDRVVLMSTYLTPNNTGCIWDTKIVLDNEPTGVTVADKEWQPIGNYQDLDVEQLAREVKLRATFVANNYISPLLSLDDIMFAGFLTALKGSYVSRNINMTDSPYNTVKISYEAFLPANTTVKAQFSTDAGITWKDLTSTPVVTQQTADFYKYEYEEKVIQSGTYKGFKVRLNLASQNSFLRPRARRLMCLMKDE
Physico‐chemical
properties
protein length:1151 AA
molecular weight: 128176,02430 Da
isoelectric point:5,01049
aromaticity:0,09470
hydropathy:-0,39583

Domains

Domains [InterPro]
IPR032096
STR
10–613
IPR032096
DC_0082
RBD
588–1151
DC_0082
YP_010843755.1
1 1151
Architecture
STR
RBD
STR 10-613 | RBD 614-1151
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage WIL-1
[NCBI] 		1541821 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010843755.1 [NCBI]
Genbank nucleotide accession
NC_025440.1 [NCBI]
CDS location
range 93386 -> 96841
strand -
CDS
TTGGCAGATTTCAATTTTAGTTCAGCACCATATCATAATAGGTTCAATGCCTTGAATGATTGGACATTAGCACTTTTCCAACCAGACAGACCCCTTCAACAGTCCGAGTTAAACGAAATGCAATCTATTTTGCATTATTACCTAAAATCTGTTGGGGATGCTGTTTTTTCTGATGGGAACATGCAGACAGGTATGGAGTTTGTCTTGGATAACTCAGGAAACTTAACTGTTGGTGATGGTCAAGTTTATGTTGAGGGCAAAGTAAGAAACTTCAAAAAACAAACTATAAAATTAAATAAGATAGGTAGAGAGTTTGTAGGAGTAAAAGTAGAACAGTCTATTATTACCGCAGACCAAGACAGTAGTCTTCTAGACCAAACAGCAGGAGTTCCTAGTGCTTTTTCTAAAGGAGCTGACAGACTAAAAGAAACTGTTGTTTTAACGTTAGACGACCCTCAGTCAGCAACTATCTACCAATTTGATAATGGAAAACTTTTTGTCTCCTCTGATAACCCAGAGATGACAAAAATAAACGAAATTCTAGCTGAAAGAACATACGATGAATCAGGCTCTTATCGTGTTAACGGTTTTAACATGTGGACAGAACCTCATCCGACAGACACTAGTAAAATTCAGTTAGTTATTGACACAGGTAGAGCTTATGTGTTAGGATACAAGGTAGATAAACCAACATCTACACGTATACCTTTAGATAAAGCTAGAGATACTCGTAGTGTAGCCAATGAAGGGCAATACTACGATACAGCAGTTAACCGTATTAAGCTAGGAAACAGTCCTGTAGAAACAGTAACACGAGTTACAGGTCAAGTTCAAGTACCTAAGGAGCAAGTGAGCAGAGGTTCTCAATCAGGAGGCACCGACTTCTTGAGTAGAACTTCTGTATTCCAGATAGACCGTGTGTGGACAGAAAACCCAACATCAGGAGAAGTTATTAAGGAATACACTCAAGGGACAGACTTCCAATTAATAAATGGACAAGCGGTTTCATGGGCACCTAACGGAGCAGAACCTACGGCAGGAGCAACTTACTATGTATCTTACCGCTATAACAAGTCTATGGTACTGAATACAGACTACAAGATAACTATTGAAGGTACAGGGGATACAAAAACTTGGTATATTGATTTTAGTGATATGACAGGAAGTAAACCTATTCAACAAAGTTTAGTAAACGTTGATTACAACTACTACTTGGCTCGTAAAGACCTAATAGTACTTGATAGATACGGAGAAGTTACAGTACACAAAGGACAACCAGATAACTTAAGATTAGCAGAAGCGCCTGCACAGGTAGACCCTTCAACACTTCAAATTGGGGTAGTTACTATTTACCCTGAAAGTGAGACCGCTAGTGCTATGTCATTCTCTGTTACTCGTCTTTCTATGGCTGATTTACAAAAAATGAGAACACGTATTGATAATATTGAGTATAACGAAGCAGTAAATGCTTTAGATAATCCTGCAATGGCAGGGGAAAACCCAGTGACATTACGTTCTGTATTCTCAGACGGTTTTATTTCACTAGACAAATACGATAGCACGCATCCAGATGCTATTATAGCTTTTAGTTTTGAGGATGCAGAAATTACCCTACCCTACCAAGAAGTTAACAAGGTAGTTCCAAAAATGCTAGAGAACGCATCAGAAGCTTATGTTTGGGGACGTTTAGTATCAGCACCATTTACAGAAGAGAAAACAATTTCTCAACCTTTTGCATCAGAAGCTATGAACGTAAACCCATATAACGTGTTTAATAAACAAGGGGTTATTACTTTAACACCTTCTGCGGATAACTGGATTGAGGAAGAACGAGTAACTGTAACTCAAGACGAAGTTAAGTCTTATACGGTAAACCGTTGGTGGCTACATGGAGGTAACTACTATTCTGATGAAGCTAGATACTTGCATAACAACCTAGCACTAGATGCAGGGCAGTCATGGAGTGGAACTCCTTCTCAGAATAAACAAGTAACAGGAACAACATTAACAGCAGGTGGACAACAAACACTTGAGTCTATGATAGAGTTTATGCGACAAATTGATATAGTGGTAGAAGGTAAAAACTACTTGCCTAACGCTAACAACTTATACGCACTATTCGATGGTGTTCGGGTACCTATTACACCAGCTTCTGGTTACCGAAAAGGTACAGATACAGGAACATTAATGGCTAATGCAGATGGGACAGTAAAAGGAACTATCACTATTCCAGCAGGTATCCGTTGTGGTGTGAGAGAAGTAACTTTACGGAATGCAGATAACTTAGGTATTTCTACATTCACTGCACAAGGTAGAAAGAAAACCGTGCAGGACATCATTATTAGAACTCACGTAACAGCTAACTTGTATGACCCATTAGCTCAGTCGTTCCAATTTACAGATGACCGAGTTATAACTAGCTTAGGGTTACATTTTGCTAGTAAAGATGCAGGAGAAAACAACGTTATTGTTCAGATTAGAGGTATGAGTGACGGAGGACAACCAAATAAAACTATTTATGCAGAAAGGGTATTAACCCCAGCTCAAGTAAATGTATCTGCTGACAGTAGTAAAGAAACTAAAGTCACTTTTGATGACCCAATTATGTGTAAAGCAGGTCAAGAGTACTGTATCGTTATTGTAACAGACTCTGATAGCTACACTATGTGGTTAGGTACTAGAGGTAAACCTAGAATAGACTCACCTAGCGACTTAATTACGTCAAACCCTTATGTACAAGGTGTACTATTTAGTTCTTCTAATGCTTCTACATGGACAGCACACCAAGATTCTGATTTGAAGTTTAATGTATATACTGCTAAGTTTAACGAACAAGCTGTACTAGAATTTGACACAATGAAAAATGTTAAAGTTGATAGAGTCGTACTAATGAGTACGTACCTAACTCCTAATAACACAGGATGTATCTGGGATACGAAGATTGTTCTAGACAATGAACCTACAGGAGTTACAGTAGCAGACAAAGAATGGCAACCAATTGGTAACTACCAAGATTTGGATGTAGAGCAATTAGCTAGAGAAGTCAAGTTAAGAGCTACTTTTGTTGCTAACAACTACATTTCACCATTGTTATCATTGGACGACATCATGTTTGCAGGTTTCTTAACTGCTTTAAAAGGTAGTTATGTTAGTAGAAATATTAATATGACAGACTCTCCTTATAATACAGTTAAGATTAGTTACGAAGCTTTCCTACCAGCTAACACTACAGTAAAAGCACAGTTTAGTACTGATGCAGGTATTACATGGAAAGACTTGACGTCTACTCCTGTAGTAACACAACAAACAGCCGATTTCTACAAGTATGAATACGAAGAGAAAGTCATCCAATCAGGCACATATAAAGGATTTAAGGTTCGACTGAACTTAGCTTCACAAAACAGTTTCTTAAGACCTCGTGCTCGGAGACTAATGTGTTTAATGAAAGATGAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
b94a9f45201886e38e30fc7c74dd23cc52a29dcf84dcb1c9e8e4a5475ac4b594
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7992
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequencing of lytic Listeria phages isolated from washing water of food industry Silva-Castro,G.A., Rodriguez-Calvo,A. and Calvo,C. 2022-08-18 — GenBank