Protein
View in Explore- Genbank accession
- AQN31825.1 [GenBank]
- Protein name
- tail fiber protein
- RBP type
-
TF
- Protein sequence
-
MYASGGFYSYNNFLPYLDSQVSLGSAGNRWTTVYAATGTINTSDGTLKTNKEEIEGQLLTAWEDIHVISFKWLESLAIKGDTARIHFGVIAQDVRDILVDHGLMEKDSTDCKYAFLCYDSIEAAYDIDEDGQTVQVSPPGGRWGVRADQMFFIEIAYQRKKMREFEKRLAALEDK
- Physico‐chemical
properties -
protein length: 175 AA molecular weight: 19772,94130 Da isoelectric point: 4,78456 aromaticity: 0,12000 hydropathy: -0,34343
Domains
Domains [InterPro]
IPR044914
RBD
1–55
RBD
1–55
IPR024430
ENZ
1–42
ENZ
1–42
SSF69349
STR
1–42
STR
1–42
DC_0783
STR
2–131
STR
2–131
IPR030392
CHP
43–175
CHP
43–175
1
175
Architecture
STR 1-131 | CHP 132-145 | RBD 146-175
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Escherichia phage G_AB-2017 [NCBI] |
1933113 | No lineage information |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AQN31825.1
[NCBI]
Genbank nucleotide accession
KY295895.1
[NCBI]
CDS location
range 40856 -> 41383
strand -
strand -
CDS
ATGTATGCGTCAGGAGGCTTCTACTCATACAACAATTTTCTTCCTTACTTAGACTCGCAAGTGTCTTTAGGTTCGGCAGGTAATAGGTGGACTACGGTGTACGCGGCCACCGGTACGATAAACACGTCTGATGGTACACTTAAGACGAACAAAGAGGAAATTGAGGGACAACTCCTTACCGCATGGGAGGATATACATGTAATATCTTTTAAGTGGCTTGAAAGCCTAGCAATCAAGGGTGACACTGCAAGGATACACTTCGGTGTGATAGCCCAAGATGTGCGAGACATCTTGGTCGACCATGGGCTTATGGAGAAAGATTCTACCGATTGTAAATATGCTTTCTTGTGCTACGACTCAATTGAAGCCGCGTATGATATTGATGAAGATGGCCAGACTGTACAAGTATCCCCTCCCGGCGGCAGATGGGGGGTTAGGGCGGACCAGATGTTCTTCATAGAGATTGCCTATCAGCGTAAGAAGATGCGCGAGTTCGAGAAGAGGCTGGCAGCACTAGAAGATAAATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
5d20660b50cbc44e00f919cb418b5c0e681c3c3c93b50692e700f755f724dc69
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Biological and genomic characterization of a historic collection of therapeutic Escherichia coli bacteriophage | Baig,A., Colom,J., Atterbury,R. and Barrow,P. | 2017-08-30 | — | GenBank |