Protein

View in Explore
Genbank accession
URA07228.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,53
Protein sequence
MALIFNLPMTGPNGSTTITDTTGNFSWSVTGNAQIQSNALVLDGSGDYVSTTADDRMRLGAINIFRLAFDMKMASADSSGYKIVFDQLNTGVSAWTWQVYIYNGVPYFNVYHPSFGNPTVVQGSASIADGNWHTVEFIRANGSMQLWVDGVVVSSAADNRDYIIQSAFGIGSRIGYNASSAYDYKGELRNLSLEITEPVVLTGRIAAWIKRNIIGWDRARTRSYIRRSVFYSFPPLETKMRSYVRITRGVPPWWGPSGSTTQLPTYKLRGRVMQRDPDGVLPDAPVQYARVALFFRRLHTLVDIQLSDVDGYVQFDNLMPGGQAYYAIAFDPEGAPLQNAVIWDRLTPEPGP
Physico‐chemical
properties
protein length:352 AA
molecular weight: 39075,63760 Da
isoelectric point:6,84293
aromaticity:0,12216
hydropathy:-0,16165

Domains

Domains [InterPro]
DC_2085
STR
3–195
DC_2085
G3DSA:2.60.120.200
STR
7–226
G3DSA:2.60.120.200
IPR013320
STR
10–192
IPR013320
PF13385
LEC
43–191
PF13385
DC_0374
STR
164–352
DC_0374
URA07228.1
1 352
Architecture
STR
STR 3-352
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Seregon
[NCBI] 		2939133 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
URA07228.1 [NCBI]
Genbank nucleotide accession
ON189048.1 [NCBI]
CDS location
range 34335 -> 35393
strand +
CDS
ATGGCGCTCATCTTCAACCTGCCGATGACGGGGCCGAATGGCTCCACGACAATCACCGACACCACGGGGAACTTCTCGTGGTCGGTGACAGGCAATGCGCAGATTCAATCGAACGCTCTCGTCCTTGACGGGAGCGGAGATTATGTGAGCACGACTGCTGACGACCGCATGCGGCTCGGAGCGATCAACATTTTCCGCCTCGCTTTCGACATGAAGATGGCGTCGGCGGACAGCAGCGGCTACAAGATCGTTTTCGATCAACTCAATACTGGCGTCAGCGCATGGACATGGCAGGTCTACATCTACAACGGCGTGCCGTATTTCAACGTCTACCATCCGAGCTTCGGCAACCCGACAGTCGTACAGGGGAGCGCAAGCATAGCGGACGGCAACTGGCACACGGTCGAGTTCATCCGAGCTAACGGGTCGATGCAGTTGTGGGTCGACGGCGTTGTGGTGTCGTCGGCTGCGGATAACCGCGACTACATCATCCAATCGGCGTTCGGCATCGGTTCTCGCATCGGCTACAACGCATCGTCTGCTTATGACTACAAAGGCGAACTGCGCAATCTCAGTTTGGAAATCACCGAGCCGGTAGTGCTGACCGGACGCATCGCTGCGTGGATCAAGCGCAACATCATCGGCTGGGATCGAGCGCGTACTCGCAGTTATATTCGGCGCAGCGTCTTCTACAGCTTCCCGCCGCTCGAAACGAAGATGCGCTCGTACGTCCGCATCACGCGCGGCGTGCCGCCGTGGTGGGGGCCGAGCGGATCGACCACGCAGCTCCCGACGTACAAGCTGCGCGGCCGGGTGATGCAGCGTGATCCTGACGGGGTGCTGCCGGATGCGCCGGTACAGTACGCGCGCGTCGCTTTGTTCTTCCGGCGCTTGCATACGCTCGTAGACATCCAGCTCTCCGATGTCGATGGCTACGTGCAATTCGATAACCTCATGCCCGGCGGTCAGGCGTACTACGCCATCGCATTCGATCCTGAAGGCGCGCCGTTGCAGAACGCGGTCATTTGGGATCGACTGACACCCGAGCCCGGGCCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
cdeae6ff698b0466a2cbdbe31639b0f651ef0391729da2802a93eae0fab4ded9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of novel Xanthomonas phages for the plant pathogens X. translucens and X. campestris Erdrich,S.H., Sharma,V., Schurr,U., Arsova,B. and Frunzke,J. 2022 — GenBank
Xanthomonas phages Erdrich,S.H., Sharma,V., Arsova,B., Frunzke,J. and Schurr,U. — — GenBank