Protein

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Genbank accession
AGG54527.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSIESNGDKSMTIKLNGSSSGSVSIDAPASTTGGADVTFNLPVADGTNGQAITTNASGQLGWGTIPTGTWTHATEHTSVGNNQAHTLELTVPSGCKYYQFIYRNFSHNNPGATSNLLLSLGTSSAYPTADASYSGAGHRSGASNDGHTAVASETATILLSYGADAHGDVRHGIVKLTPFGNNSNYWTVESIGYSPSNSTTLTHTFTIVDVLGDLGKFKFWNDGGQYWDSGAYAVHYIT
Physico‐chemical
properties
protein length:238 AA
molecular weight: 24868,68400 Da
isoelectric point:5,55024
aromaticity:0,09664
hydropathy:-0,30042

Domains

Domains [InterPro]
DC_1797
STR
1–105
DC_1797
AGG54527.1
1 238
Architecture
STR
STR 1-105 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage SS120-1
[NCBI] 		616674 Uroviricota > Caudoviricetes > Autographivirales > Banchanvirus SS1201 >
Host Prochlorococcus marinus subsp. marinus str. CCMP1375
[NCBI] 		167539 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus > Prochlorococcus marinus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGG54527.1 [NCBI]
Genbank nucleotide accession
HQ316584.1 [NCBI]
CDS location
range 14666 -> 15382
strand -
CDS
ATGTCAATTGAGAGTAACGGAGATAAGAGTATGACAATAAAACTAAACGGCTCCTCATCAGGGAGCGTATCAATAGATGCTCCTGCTAGTACAACAGGTGGAGCAGATGTAACATTTAACTTACCTGTAGCAGATGGTACGAATGGCCAAGCTATAACGACAAATGCTTCAGGTCAACTTGGATGGGGCACCATACCCACAGGAACTTGGACACATGCTACTGAACATACTAGTGTTGGTAATAACCAAGCACATACATTAGAATTAACTGTACCTTCTGGTTGTAAATACTATCAGTTTATATATAGGAATTTTTCACATAATAATCCCGGGGCTACTTCTAACTTACTTTTAAGTTTAGGAACATCATCTGCTTACCCAACTGCTGATGCTAGTTATTCAGGTGCAGGTCATCGTTCTGGTGCAAGTAATGATGGACATACAGCAGTAGCTTCTGAAACAGCAACTATTCTTTTATCATATGGTGCTGATGCTCATGGTGACGTTAGACATGGGATTGTAAAACTTACTCCATTTGGTAATAATAGTAATTATTGGACAGTAGAATCAATAGGATATAGTCCTTCAAATAGTACAACATTAACCCATACATTTACTATAGTTGATGTTCTAGGAGATTTAGGTAAATTTAAATTCTGGAATGATGGTGGTCAATATTGGGATAGTGGAGCTTATGCTGTTCATTATATAACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
08fddd1d51215fb321b1512c0d7d6b54b26273e52bd0d33a80584dfab10b615f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7313
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-SSP9 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank