Protein

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Genbank accession
VFR13193.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGDCTIKDYRLDVPPLFNGDDGWTLTFRIVIRTILPDSAVENAHFSWYCVNDHDTDVEPKPAAPNYTTIDQVEWKQVIIRPEDATLSGYQPDFRFEDTDKWRWWWMLPATNGTDAGVAPPQSIVYRADADFNTIVEALFPNDDAGFIIGFWFYGGCTWQEKFENNIYDGRSGMTNPANGEDYIIADARACSDPGSTSMEVEQHDIDLGHLARVDINPVKADTEEVNWYGCTLLRVTYGGVCDNGDALACKVIAVQNFMEQQAVRFRINSQSNTVEVAYSRDENGDIVFRSEDSKLAETPFTDGISYDYKYPSVFYTAHEYTYIDAKDKFFRRACYLLWRITGEPRYKAALDSLKGSVNQMGNAADAEVWFIEHGGYLFDRNEPWHNRPVHTPKDTSINGVYLINYASQVPVDQDGDVIESGLPDAQKGTVQFTSKGPRYEPDWFVVWTGEKVVDWNTMLNDPTGYTPMWGGSSKVPDYLIVNPEKPYDVKAWGAVNADVQKIKESEDGLID
Physico‐chemical
properties
protein length:511 AA
molecular weight: 57880,46430 Da
isoelectric point:4,46507
aromaticity:0,12916
hydropathy:-0,49511

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VFR13193.1
1 511
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0237
Central domain 11 334 325 0,5670
C-terminal 335 511 176 0,1538
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-334
C-terminal
335-511

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM12
[NCBI] 		2528682 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR13193.1 [NCBI]
Genbank nucleotide accession
LR535911 [NCBI]
CDS location
range 133785 -> 135320
strand +
CDS
GTGGGCGATTGTACGATAAAAGATTACCGTCTTGATGTTCCGCCACTGTTTAATGGAGACGATGGTTGGACGTTAACGTTCCGTATTGTAATTCGAACCATACTGCCCGATTCGGCTGTGGAGAATGCGCACTTTAGCTGGTATTGCGTAAACGACCACGATACCGACGTCGAACCAAAACCGGCTGCGCCAAACTATACAACTATCGATCAGGTGGAATGGAAACAGGTTATTATTCGCCCTGAAGACGCAACACTCTCGGGCTATCAACCTGACTTCCGTTTCGAAGATACCGACAAGTGGCGTTGGTGGTGGATGTTGCCCGCGACTAACGGAACCGATGCCGGCGTTGCACCCCCGCAGTCAATTGTCTATCGTGCCGATGCTGATTTCAACACAATCGTAGAAGCGTTATTCCCGAACGACGATGCGGGTTTCATTATCGGTTTCTGGTTCTACGGTGGGTGTACGTGGCAGGAGAAGTTTGAGAACAACATTTACGATGGTCGTTCAGGAATGACCAATCCGGCCAACGGCGAAGATTACATCATTGCCGATGCGCGAGCATGTTCGGATCCGGGATCAACATCGATGGAAGTAGAACAGCATGACATCGATTTAGGGCATCTGGCCAGGGTGGATATTAACCCCGTCAAAGCGGATACTGAAGAAGTAAACTGGTACGGCTGTACGCTGTTACGTGTGACGTATGGCGGTGTTTGCGACAACGGTGATGCACTTGCGTGTAAAGTGATAGCTGTGCAGAACTTTATGGAACAGCAAGCCGTGCGTTTCAGGATAAACAGTCAATCGAACACTGTTGAGGTCGCTTACAGTCGTGATGAAAATGGTGATATTGTGTTCCGTTCTGAGGATTCTAAGCTAGCCGAAACGCCATTTACAGATGGTATCTCGTACGACTATAAATACCCCAGTGTGTTCTATACAGCGCACGAGTACACGTATATCGATGCGAAGGACAAGTTTTTCCGTCGTGCCTGTTATCTGCTCTGGCGTATCACGGGTGAACCGCGCTATAAAGCCGCATTAGACTCGTTAAAAGGGTCTGTTAACCAGATGGGTAACGCGGCAGATGCGGAAGTGTGGTTTATTGAGCACGGCGGATATTTGTTTGACCGCAATGAGCCGTGGCACAACCGTCCGGTTCATACCCCAAAGGACACTAGTATTAACGGTGTATATTTGATTAACTACGCTTCCCAGGTACCTGTAGATCAAGACGGCGATGTCATCGAATCCGGTTTACCTGATGCCCAGAAAGGAACCGTACAATTTACCTCGAAAGGTCCGCGGTACGAACCTGACTGGTTTGTTGTGTGGACGGGTGAGAAGGTGGTGGACTGGAACACGATGCTAAACGACCCAACCGGATATACACCAATGTGGGGCGGTTCGTCTAAAGTCCCTGATTACTTAATCGTCAATCCAGAGAAACCTTACGATGTAAAAGCGTGGGGTGCGGTTAATGCCGACGTACAGAAAATTAAGGAATCGGAAGACGGGTTAATTGACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
1346a2fe29cff8bf3ba1e19420e9b0f21c6dda125bc3bb74c1c1dab0976e4e7f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2633
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50