Protein

View in Explore
Genbank accession
QPD96170.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MENSINADSSSATIVFASNPVAYATISEIVNDTSLRATSTGGAVVPQSDYVILLHDSITVDGLAQDVAETLRYYQGQETMYQEFVEFLKNFDWQKLEAIDAEVKENSAAAAGSAANALRSEQNSFVHSQNASASASAAAASESAAGQSAQAAQVSESNANSYRVAAENSANSAAAHDQSALASKNAAAASEANALQSEKNAAVHSGNASASASAAAASEGAAKQSETNAAASAAASDASKNESQAAAVISTNASNSASASKDAAAQSAASAKSEADRAAELATQLDANSLMRKDANLSDVADRRSAVNNLGLGWIDTAFNNSLVSSPDLSHRLVLGNDGLFVWQTAGGNTVPIPIGAGGTGATDVAGARNNFGLGDGQAVTFAQITSKQWNGANGGILISDNLNSSGERVSQSRFYSEVQGGICKTTIHTSGNGKNNYLQIDEDGNISGARDINMHHAYTAGVSCTGWISANQGGRVGLNTQSGGNKDIYLQNVDGDGNVGSWVNLLQGNWYNGYWQLGAIRGSGNDISTVRLGVNNRARIGNGLISTTRMVVT
Physico‐chemical
properties
protein length:554 AA
molecular weight: 56752,68010 Da
isoelectric point:4,80144
aromaticity:0,05415
hydropathy:-0,29350

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPD96170.1
1 554
Domain Start End Length (AA) Confidence
N-terminal 1 210 210 0,7418
Central domain 211 409 200 0,4549
C-terminal 410 554 144 0,7113
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-210
Central
211-409
C-terminal
410-554

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage N5822
[NCBI] 		2777323 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPD96170.1 [NCBI]
Genbank nucleotide accession
MW032452.1 [NCBI]
CDS location
range 16533 -> 18197
strand +
CDS
GTGGAAAACAGCATTAACGCTGATTCGTCCAGTGCAACAATCGTGTTTGCATCCAATCCGGTTGCATACGCAACAATTAGCGAGATCGTAAATGATACGTCACTGCGTGCAACATCTACAGGCGGCGCTGTCGTTCCTCAAAGCGACTATGTGATCCTGCTGCATGACTCAATCACTGTTGACGGCCTGGCGCAAGACGTCGCGGAAACTCTGCGTTATTACCAGGGGCAGGAAACAATGTATCAAGAGTTTGTTGAGTTTCTTAAGAATTTCGACTGGCAAAAACTAGAAGCAATCGACGCAGAAGTAAAAGAGAACTCAGCAGCGGCGGCGGGTAGCGCGGCAAATGCTTTGCGGTCAGAACAAAACTCATTCGTGCATAGCCAGAACGCAAGCGCATCAGCGAGTGCAGCAGCAGCAAGCGAGAGCGCGGCAGGTCAAAGCGCACAGGCGGCTCAAGTTAGCGAAAGCAACGCCAACTCTTACAGAGTAGCAGCCGAAAACAGCGCCAACTCAGCAGCAGCACACGATCAGTCGGCTCTCGCGTCAAAGAATGCAGCAGCAGCAAGCGAGGCAAACGCCCTGCAATCAGAGAAAAATGCGGCTGTTCATAGCGGAAACGCAAGCGCATCAGCGAGTGCAGCAGCAGCAAGCGAGGGCGCGGCGAAACAAAGCGAGACAAATGCGGCGGCAAGCGCAGCGGCATCGGACGCATCAAAAAATGAGTCTCAGGCCGCAGCGGTGATCTCGACAAACGCAAGCAACTCAGCCAGCGCAAGCAAAGACGCAGCAGCACAATCAGCAGCAAGCGCAAAGAGTGAAGCGGATCGCGCGGCGGAGCTTGCAACTCAGCTTGACGCTAACAGCCTAATGCGAAAGGACGCTAACCTGTCAGACGTAGCTGATCGACGTTCCGCCGTTAATAACTTGGGCTTGGGATGGATTGATACCGCATTCAATAACAGCCTAGTATCATCGCCAGACTTATCACACCGCTTGGTTTTGGGTAATGACGGTCTGTTTGTGTGGCAAACTGCTGGCGGGAATACGGTTCCGATCCCAATTGGCGCTGGGGGTACTGGTGCAACGGATGTTGCTGGCGCTCGCAATAACTTTGGTCTTGGAGATGGTCAAGCTGTAACATTCGCTCAGATCACTAGTAAGCAATGGAACGGCGCAAACGGCGGGATATTAATTAGTGACAACCTAAACTCCTCCGGTGAGCGTGTTAGCCAATCAAGGTTTTATAGTGAGGTTCAGGGTGGGATATGTAAGACAACAATCCACACGTCTGGAAATGGTAAAAATAATTATCTACAGATTGACGAGGACGGCAATATTAGCGGTGCTCGTGACATAAATATGCATCACGCTTACACTGCTGGCGTTAGCTGCACTGGCTGGATTAGCGCGAATCAGGGCGGTAGAGTTGGCCTTAACACGCAGAGTGGTGGCAATAAGGATATCTACCTTCAAAACGTTGATGGGGACGGTAACGTTGGTTCGTGGGTCAACCTTCTGCAAGGTAACTGGTATAACGGATACTGGCAGTTAGGAGCAATTCGCGGGTCTGGTAACGACATTTCAACCGTTAGACTTGGCGTTAACAACCGGGCGCGGATTGGAAATGGTTTGATTTCAACAACTCGTATGGTGGTCACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b48042a84a7b7bcd3ccb5a87150ce8374fa69f816313bc5aee16f296a4fdad1a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6578
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The prospects of a novel, highly virulent, biofilm dispersing bacteriophage isolated from environment for controlling Enterobacter Cloacae in clinical medicine Nair,A., Vyawahare,R. and Khairnar,K. 2019 — GenBank