Protein

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Genbank accession
AYJ73690.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MATAKITPNASTWTQVSDGTSLKTLQVTHGSVYLCDSPSTPTGNNAHIIYQGNMVVLTPPTVGWVKAINSDATVIIS
Physico‐chemical
properties
protein length:77 AA
molecular weight: 8073,06380 Da
isoelectric point:6,68815
aromaticity:0,05195
hydropathy:0,09221

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PS5
[NCBI] 		2420341 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYJ73690.1 [NCBI]
Genbank nucleotide accession
MH940212.1 [NCBI]
CDS location
range 110622 -> 110855
strand +
CDS
ATGGCAACTGCTAAGATCACACCAAACGCAAGTACATGGACGCAAGTCTCAGACGGCACATCTTTGAAAACTCTTCAAGTGACTCACGGTTCTGTGTATCTGTGTGATAGCCCCAGCACTCCAACGGGTAACAACGCGCATATCATATATCAAGGAAATATGGTCGTTTTAACCCCGCCGACGGTGGGATGGGTTAAGGCAATTAATTCTGATGCGACGGTTATCATTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f836a5927467be47c25d989ae77686c036aebb49d251c3fb08aef64c15311be7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9183
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Application of bacteriophage PS5 for controlling Salmonella Minh,D.H., Minh,S.H., Masuda,Y., Honjoh,K.-I. and Miyamoto,T. 2023-01 — GenBank