Protein

View in Explore
Genbank accession
XPA09435.1 [GenBank]
Protein name
tail fiber domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MANILKPKSRSTDATAPTISSLADGEIAVNSFSKRIFQRVGTQIVAIASYFGGTWDDITGKPFTLDGYGIVDAALDANVVHLAGSETITGPKNFTGGLSTHGLTVGAGSVTSAGIEIGGTAGTATTPFIDFHSGATTADYDARVIASGGNGAPGGGSLRLIAANLYAGAAGTNSLWYTGNPNNPTTLAGYGITDAQAKDATLTALAGLATVANRIPYFTGTDTAGMLTLSTDGTLAGNSDTTISSQKAVKTYIDGRIAAADAMVFKGVIDCSTSPNYPAADMGWTYRVSATGKIGGASGPNVEVGDILICIADATAAGDQATVGAQWAIIQTNIDGALTTAQLGSVVQPYDAGLANFANVATAANKGIYATAPDVFATYDLSAAGRALAATAGTANTFPYFSAANVVTLQTITAQGRALLDDADAAAQRATLGLGTAAMSASTDFANATHQHAGEDIASGTIADARLPTLMTGKQFTSAVIVGGSVTSNSGSVTSGAGNVISRAVAGANAHYYLNDETGAVQGLLYWDRNNDVLRLRRYNAAGNAAEGELTLGATSLTWNAQNLWHAGNFDPATKADATHAHVVSDVTGLQAALDAKLATSGTAAAATKLATARTINGVPFDGTANISIAAAVDLRYSPAAVADLPSTYPLNPSIGQVNTGTGWPGGRLGTVMSAITDSAGNRSFQLFSPNNGGTNTPELWVRSHHTSDGGGGWTGFAKLWHGSSRQIQADFTNAATRSEFQTNVANQTTNLVTIPNGTAASSGFVATNAADSANATWAQLGMSGATPFIGVGKSGTGAAPAALYFLFQGTEKAKINADGTFYSQGGYFTLKDNTTATWAMLLNSANGATSYGGIWYDTNNVQLINNMDGWRSLTLAKDGTVTMDKANVNGDVQLLSGGKVKFNNAIRQHITLWETSTTAGSESSYGLGVQNSASYWRSDSAFALFMKGTHAATQFDPGSNGTLVAKFDKLNEVSQLYTNVLGLGGAGNYARLQWGTDQGHQVVFRASITGSYPNLTYNIADCTTFFEYGDTWRWRNQTVERMSLTTQGLYLNGWFRANGATGLYFETYGGGWTMTDSTWLRSYNQKPLLINCSAGTVARWESPSPTHEFYDTDEGYSSWLHLNGGSHGFLQHNSFAWGAYRTNGNEWHCVGNVVAYASDERLKKNFKPLDPAKRAAFFDNFEVEEYDWNADAINELNPGFHPTRWHEVGARAQRVEAVYEGMVHTHNRPRLKDQKGPDPQIKTLMWEKAVPFLIAEVQELRRQVAALKSA
Physico‐chemical
properties
protein length:1271 AA
molecular weight: 133312,89240 Da
isoelectric point:5,69529
aromaticity:0,09363
hydropathy:-0,17026

Domains

Domains [InterPro]
DC_0590
STR
7–272
DC_0590 DC_1812 DC_0405
G3DSA:6.10.140.2190
STR
71–102
G3DSA:6.10.140.2190 IPR030392
IPR030392
CHP
1159–1271
IPR030392
XPA09435.1
1 1271
Architecture
STR
STR
STR
STR 7-272 | STR 483-696 | STR 859-1271
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage vB_Xcc_GYRb1
[NCBI] 		3454946 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas campestris pv. campestris str. 8004
[NCBI] 		314565 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas campestris

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPA09435.1 [NCBI]
Genbank nucleotide accession
PQ569993.1 [NCBI]
CDS location
range 21719 -> 25534
strand +
CDS
ATGGCGAACATCCTCAAACCCAAGTCGCGCTCCACCGACGCGACCGCGCCGACGATTAGCTCCCTCGCTGACGGCGAAATTGCGGTCAACTCCTTCAGTAAACGCATCTTCCAGCGCGTCGGCACGCAGATCGTCGCCATTGCCAGCTACTTCGGCGGAACGTGGGACGACATCACCGGGAAGCCGTTTACGCTGGACGGATACGGCATCGTCGATGCGGCGCTCGACGCCAATGTCGTCCACCTCGCGGGCAGCGAGACGATCACCGGTCCCAAGAACTTCACGGGCGGCCTCTCGACTCACGGCCTCACGGTCGGAGCTGGCAGCGTTACCTCCGCCGGAATCGAGATTGGCGGCACGGCCGGCACCGCGACCACGCCGTTCATCGACTTCCACAGCGGCGCGACAACCGCCGACTACGATGCGCGCGTCATCGCCAGCGGTGGCAACGGCGCGCCGGGCGGGGGATCGCTGCGCCTGATTGCCGCGAACCTGTACGCGGGCGCTGCGGGCACGAACTCGCTTTGGTACACCGGCAACCCCAATAACCCGACCACGCTCGCCGGCTACGGCATCACCGATGCGCAGGCGAAGGACGCCACGCTGACCGCGCTCGCCGGGCTGGCCACTGTCGCGAACCGCATCCCGTATTTCACCGGCACCGACACGGCTGGCATGTTGACGCTGAGCACGGATGGCACGCTCGCCGGGAACAGCGACACCACGATCAGCTCGCAGAAGGCGGTCAAGACCTACATCGACGGCCGCATTGCCGCCGCCGACGCGATGGTGTTCAAGGGCGTCATCGACTGCTCGACGAGCCCGAACTACCCAGCAGCGGACATGGGCTGGACGTATCGCGTAAGCGCCACCGGCAAGATCGGCGGCGCCTCCGGCCCGAACGTCGAGGTCGGCGACATCCTCATCTGCATCGCGGACGCGACCGCCGCCGGCGACCAAGCAACCGTCGGCGCGCAGTGGGCGATCATCCAGACCAACATCGACGGCGCGTTGACCACGGCGCAGCTCGGCAGCGTGGTGCAGCCCTACGACGCCGGGCTGGCCAACTTCGCCAACGTCGCGACGGCCGCGAACAAGGGCATCTACGCGACCGCGCCAGATGTCTTCGCCACCTACGACCTGTCGGCCGCCGGCCGCGCGCTGGCCGCCACTGCAGGCACGGCGAACACGTTCCCGTACTTCAGCGCCGCCAACGTCGTCACGCTGCAGACGATCACTGCGCAGGGCCGCGCGCTGCTCGACGACGCCGACGCGGCCGCGCAACGCGCAACGCTGGGCCTCGGAACGGCCGCCATGTCCGCGAGCACGGACTTCGCGAACGCCACGCACCAGCACGCCGGCGAGGACATCGCCAGCGGCACCATCGCTGATGCGCGCCTGCCAACCTTGATGACGGGCAAGCAGTTCACCTCCGCCGTGATCGTGGGCGGCAGCGTGACCTCGAACTCGGGCAGCGTCACGTCCGGCGCTGGCAACGTCATCTCGCGCGCCGTGGCTGGCGCCAATGCGCACTACTACCTGAATGACGAAACCGGCGCAGTGCAGGGTTTGCTGTACTGGGACCGCAACAACGACGTGCTCCGCCTGCGTCGCTACAACGCGGCAGGCAATGCTGCAGAGGGTGAGCTGACGCTTGGGGCGACGAGCCTGACGTGGAACGCGCAGAACCTGTGGCACGCGGGCAACTTCGATCCAGCGACGAAGGCGGATGCCACGCACGCGCACGTCGTTTCGGACGTGACCGGCCTGCAGGCGGCACTCGACGCGAAGCTCGCGACGAGCGGCACCGCTGCGGCCGCGACCAAGCTGGCGACTGCGCGCACGATCAACGGCGTCCCGTTCGACGGCACGGCCAACATCTCCATCGCTGCTGCAGTGGACCTCCGATACAGCCCTGCCGCTGTCGCGGACTTGCCCTCGACGTATCCGCTCAACCCGAGCATCGGCCAAGTCAACACGGGCACGGGCTGGCCCGGCGGCCGCCTCGGCACCGTCATGTCGGCGATCACCGACTCGGCGGGCAACCGCTCCTTCCAGCTCTTCTCGCCCAACAACGGCGGGACGAACACGCCCGAGCTGTGGGTCCGCTCGCATCACACGAGCGACGGCGGCGGCGGCTGGACCGGATTCGCCAAGCTGTGGCATGGCAGCTCGCGCCAGATTCAAGCCGATTTCACGAACGCGGCGACGCGCTCGGAGTTCCAGACCAACGTCGCGAACCAGACGACCAATCTGGTGACCATCCCGAACGGCACCGCAGCCTCGTCCGGCTTCGTAGCCACGAACGCGGCCGACAGCGCCAACGCGACGTGGGCGCAGCTCGGCATGAGCGGCGCGACGCCCTTCATCGGCGTCGGTAAGAGTGGGACCGGCGCCGCGCCGGCAGCGCTCTATTTCCTCTTCCAAGGGACGGAGAAGGCCAAGATCAACGCGGACGGCACGTTCTACTCGCAGGGTGGCTATTTCACCCTCAAGGACAACACCACGGCGACGTGGGCCATGCTGCTCAACTCAGCCAATGGCGCCACGTCCTACGGCGGCATCTGGTACGACACCAACAACGTCCAGCTCATCAACAACATGGATGGGTGGAGGTCGCTGACGCTGGCCAAAGACGGCACGGTCACGATGGACAAGGCCAACGTCAATGGCGATGTCCAACTCCTGAGTGGCGGCAAGGTCAAGTTCAACAACGCGATTCGCCAGCACATCACGCTGTGGGAGACGAGCACGACTGCCGGCAGCGAGTCGAGCTATGGCTTGGGCGTACAGAACAGCGCGTCCTACTGGCGCTCGGACTCCGCGTTCGCGCTGTTCATGAAGGGCACGCACGCTGCGACCCAGTTCGATCCGGGCAGCAACGGCACGCTCGTTGCGAAGTTCGACAAGCTCAACGAAGTCTCGCAGCTCTACACCAACGTCTTGGGGCTCGGCGGCGCCGGCAACTATGCGCGCCTTCAGTGGGGCACGGACCAAGGCCATCAGGTCGTCTTCCGCGCGTCGATCACCGGCAGCTACCCGAACCTGACGTACAACATCGCCGACTGCACCACGTTCTTCGAGTACGGCGACACGTGGCGCTGGCGCAACCAGACCGTCGAGCGCATGTCGCTCACGACTCAGGGCCTATACCTCAATGGCTGGTTCCGCGCGAATGGCGCGACGGGCCTCTACTTCGAGACGTATGGCGGCGGCTGGACCATGACGGACAGCACGTGGCTTCGCAGCTACAACCAGAAGCCACTGCTCATCAACTGCTCCGCCGGCACGGTGGCGCGCTGGGAATCGCCAAGCCCGACACACGAGTTCTACGACACCGACGAAGGCTATTCGAGCTGGCTTCACCTTAACGGTGGCTCGCATGGCTTCCTGCAGCACAACTCGTTCGCGTGGGGCGCGTACCGCACCAACGGCAACGAATGGCACTGCGTCGGCAACGTCGTGGCCTACGCCTCCGACGAGCGCCTGAAGAAGAACTTCAAGCCGCTGGACCCGGCCAAGCGTGCCGCATTCTTCGACAACTTCGAGGTCGAGGAATACGACTGGAACGCCGACGCGATCAATGAGCTGAATCCCGGCTTCCATCCGACGCGTTGGCACGAAGTCGGCGCGCGCGCGCAGCGCGTCGAGGCGGTCTACGAGGGCATGGTGCATACGCACAACCGCCCGCGCCTGAAGGATCAGAAGGGGCCGGACCCGCAGATCAAGACCCTGATGTGGGAGAAGGCCGTGCCGTTCCTTATCGCCGAGGTGCAGGAACTGCGCCGCCAAGTCGCCGCGCTCAAGTCGGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
354f6578dabc3fdbb2ccb9778d897a50b711cd934cb20f6914775c1d7c4a8ac5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5258
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50