Protein

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Genbank accession
WGH49911.1 [GenBank]
Protein name
dimodular nonribosomal peptide synthetase
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAGIREQTYSISCKGGIDKTSNTQELLKLPGVAIRLLNFESSVEGGYRRINGYEKLGTGSMTAGGKQPISGITIYNNGYVIIKSSSVYFTYDGINLTEINKSVDYINNPEGVSYSELLASPLLPRANPGHYTFNVFNQGDRTILMGSCANNKPFYCVIKGTTLENSTYMYKELNLTTGNLIGANQSSKYKDQWVISGMDSAPYEIYYSDILKPDNFEGANAGAIGFNDRVVGMHMFRKDLYVFCENTIHRVVGLETGSPVREVVTEKMGCLDGNTIQEVGGDLVFLAPDGLRTLSATARIGDVNMNSLSKNVGPTIRRVTKDIDKYHVRSVVIRSKAQYRIFFTPKEDTRLPEYGFIMFLATVEGGINPEFSEIKGFQISSIFNGYKDGLEVSISGDFSGNFYFHDKGSSLDGTIMPFLYQTPFFDMGDPAYRKNIHKIVSYLTLEGNSSFNIQLKYDYDSENTYAPAPHYSGKLRAPSVYDEVNYKTSKATYSATNQPKLEILTEGSGKTVALRIFPTGEACDSFNVQGFDLYYLPGGRI
Physico‐chemical
properties
protein length:541 AA
molecular weight: 59978,98330 Da
isoelectric point:6,06469
aromaticity:0,11645
hydropathy:-0,29889

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGH49911.1
1 541
Domain Start End Length (AA) Confidence
N-terminal 1 62 62 0,9815
Central domain 63 271 210 0,2889
C-terminal 272 541 269 0,5208
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-62
Central
63-271
C-terminal
272-541

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage vB_PtuP_Slicky01
[NCBI] 		3038240 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGH49911.1 [NCBI]
Genbank nucleotide accession
OQ508958 [NCBI]
CDS location
range 767 -> 2392
strand +
CDS
ATGGCAGGGATAAGAGAACAGACTTATTCTATATCATGTAAAGGTGGTATAGATAAAACATCAAACACACAAGAGCTCCTAAAGCTCCCAGGAGTAGCCATACGGCTATTAAACTTTGAGTCCTCAGTAGAGGGTGGTTATCGTAGGATTAATGGCTATGAGAAGCTAGGGACAGGTTCTATGACTGCTGGAGGTAAGCAACCTATATCAGGTATTACTATTTATAATAATGGCTATGTTATAATTAAGTCTAGTTCTGTTTATTTTACTTATGATGGTATTAACTTAACAGAGATAAATAAATCAGTAGATTATATTAATAACCCTGAGGGTGTTAGTTACAGTGAGTTACTAGCTTCACCGTTACTACCTAGAGCTAATCCAGGTCATTATACATTTAATGTGTTTAACCAAGGAGACAGAACTATCTTAATGGGTTCTTGTGCTAACAACAAACCATTCTATTGTGTAATTAAAGGGACTACATTAGAGAACTCTACCTACATGTATAAGGAACTGAACCTAACAACAGGTAACTTAATAGGCGCTAACCAATCATCTAAGTATAAAGACCAATGGGTTATATCAGGAATGGATAGTGCCCCTTATGAGATCTACTACTCAGACATACTTAAACCAGATAACTTTGAGGGTGCTAATGCTGGTGCCATTGGTTTTAATGATAGGGTAGTAGGTATGCATATGTTTAGGAAAGATCTATATGTGTTCTGTGAGAATACAATACACAGGGTTGTCGGTCTAGAGACAGGTAGCCCAGTAAGGGAAGTGGTTACTGAGAAGATGGGTTGCTTAGATGGTAACACTATTCAAGAAGTAGGTGGTGACTTAGTGTTCCTAGCGCCCGATGGCCTAAGGACTCTATCAGCTACAGCTAGGATTGGTGATGTTAACATGAACTCACTCTCCAAGAATGTAGGACCTACAATCCGTAGGGTTACTAAGGACATAGATAAGTATCATGTAAGGTCTGTGGTCATTAGGAGTAAGGCACAATATAGAATCTTCTTTACACCTAAGGAAGATACTAGATTACCTGAGTATGGTTTCATTATGTTCCTAGCTACTGTTGAAGGTGGTATCAACCCTGAGTTCTCAGAGATTAAAGGATTCCAGATATCCTCTATATTCAATGGGTATAAGGATGGCTTAGAGGTTTCTATCTCAGGTGACTTCAGTGGTAACTTTTACTTCCATGATAAAGGCTCTAGCCTTGATGGAACTATAATGCCCTTCCTATATCAGACTCCTTTCTTTGACATGGGAGATCCTGCATATAGAAAGAACATACATAAGATTGTTTCTTACTTAACCTTAGAAGGTAATAGTAGTTTCAATATACAACTTAAGTATGATTATGATAGTGAAAATACATATGCACCAGCACCGCATTACTCAGGAAAACTAAGAGCACCTTCCGTTTATGATGAAGTAAACTACAAGACATCTAAGGCAACATATAGTGCAACTAACCAACCGAAGCTAGAGATACTAACTGAAGGGTCAGGTAAGACTGTAGCCTTAAGGATATTCCCTACAGGTGAAGCTTGTGATTCATTCAACGTACAAGGTTTTGATTTATATTACCTACCAGGCGGTAGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4ecc0c661c2b43fbe15301352db31891729ff3d8cde09772fb8fe7264fa6d7eb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8024
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecogenomics reveals distinctive viral-bacterial communities in the surface microlayer of a natural surface slick Rahlff,J., Wietz,M., Giebel,H.-A., Bayfield,O., Nilsson,E., Bergstrom,K., Kieft,K., Anantharaman,K., Ribas-Ribas,M., Schweitzer,H.D., Wurl,O., Hoetzinger,M., Antson,A. and Holmfeldt,K. 2023 — GenBank