Protein

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Genbank accession
QVV98881.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSAKITFQPVDITFSQSNGLEINYDFDNQLFRPQTIGDLFLTEIRFKAKCSAQNGYADLLVTSPSFLYNPVTAQTFNLTKGAGVEQFITVNGSIFVGEDLKENGFEVSIRAGDGNFSIYDVSFLSCRIGSGK
Physico‐chemical
properties
protein length:132 AA
molecular weight: 14516,12130 Da
isoelectric point:4,64940
aromaticity:0,12879
hydropathy:-0,04697

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage ICP1
[NCBI] 		979525 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio cholerae O1
[NCBI] 		127906 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVV98881.1 [NCBI]
Genbank nucleotide accession
MW794148.1 [NCBI]
CDS location
range 68435 -> 68833
strand -
CDS
ATGTCTGCTAAAATTACATTCCAACCTGTGGACATCACTTTCTCTCAATCCAATGGATTGGAAATAAATTACGATTTTGACAATCAATTATTCCGTCCGCAGACAATAGGTGACTTATTCCTAACAGAAATTCGCTTCAAAGCTAAATGCTCTGCACAGAATGGTTATGCGGATTTGCTAGTGACATCACCTTCGTTTTTATACAATCCGGTGACCGCCCAGACCTTTAATTTGACTAAAGGTGCGGGTGTCGAACAGTTCATTACTGTGAACGGAAGTATATTCGTCGGTGAGGATTTGAAAGAGAATGGGTTTGAAGTGAGTATTCGTGCAGGTGATGGAAACTTTAGCATATATGATGTGAGTTTCTTATCGTGTAGAATAGGTAGTGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
25c29e8cc0caf3ad38d3186dd88d5063c5fb6b768277c2540e4ab4ceabd1258c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8582
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Vibrio cholerae in Democratic Republic of Congo is Clonal and is Associated with a Unique ICP1 Bacteriophage Alam,M.T., Pisiae,T., Salemi,M., Angermeyer,A., Seed,K.D., Camilli,A., Morris,G. Jr. and Ali,A. 2021-08-03 — GenBank