Protein

View in Explore
Genbank accession
YP_010054827.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MGFSVIPEPAISGFTGPQGAAGAKGDPGVIQSINGKSAASVTLAASDVNALPSNGNALLSAQYLWLDTAAGTYRAFGYKTAGVDRWLIQVDDVAETGSAAGSNFRLSARNDDGSFNKTVIYARRDTGQIALGTTTIQGDAQVTSAAAIGMRNQTADPATNSGGAYIYAKGGLLYAKQGDGTVFQVTAGGGGGGAVQSVNGKTGAVVLAASDVGALPTSGGTAYSLSMDGGAGTYRALSWKTGGALRWATQVNDTAESGSDAGSNFELTAWGDNGGYKGTAIFAERATARVGINTGSTLEPGAALTVGGETKINGRVTATKGFTVTSTDVNQNPIIVDTPTGQAARLQVMRVNGVDQFSVGTDGSTTIAGGLTAGGTSTVPNLRVGSSGSFAGASGSIIAMANASTLPSSNPAGSILYTTGGVPRFRESNGADYAVTPVSEFTPESLGALAWAGDPDNCASGFDYCGVGTGRMTAVYVNRTMTVSKIIWHMMGYAGGLLTGSWAGIYNTSGTLQRATGDLSTAAYEPAEQHSTGGGWSSSNLTSAITLTPGVYYILWRFNYTASPVDGPALARYESAAACQSVMGNGVTVWRHASYSTSATSAPSTITVGSFGRDSIRFWVALA
Physico‐chemical
properties
protein length:623 AA
molecular weight: 63011,87190 Da
isoelectric point:5,54552
aromaticity:0,08186
hydropathy:-0,03804

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010054827.1
1 623
Domain Start End Length (AA) Confidence
N-terminal 1 257 257 0,2442
Central domain 258 456 200 0,2981
C-terminal 457 623 166 0,9721
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-257
Central
258-456
C-terminal
457-623

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptomyces phage Sentinel
[NCBI] 		2767584 No lineage information
Host Streptomyces sp.
[NCBI] 		1931 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Kitasatosporales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010054827.1 [NCBI]
Genbank nucleotide accession
NC_054658.1 [NCBI]
CDS location
range 15776 -> 17647
strand +
CDS
ATGGGCTTCTCTGTGATCCCGGAGCCGGCCATCTCCGGCTTCACCGGCCCGCAGGGTGCAGCCGGCGCCAAGGGCGATCCCGGCGTCATACAGTCGATCAACGGCAAGAGCGCGGCAAGTGTGACGCTGGCCGCGTCCGATGTGAACGCCCTGCCGAGCAACGGCAACGCCCTGCTCTCCGCTCAGTATCTGTGGCTCGACACGGCGGCCGGCACCTACCGCGCCTTCGGCTACAAGACCGCAGGCGTGGACCGCTGGCTCATCCAGGTCGACGACGTCGCCGAGACCGGCAGCGCGGCCGGCTCGAACTTCCGCCTGTCCGCCCGCAATGACGACGGCTCCTTCAACAAGACCGTCATCTACGCCCGGCGAGACACCGGGCAGATCGCCCTCGGCACCACGACGATCCAGGGCGACGCTCAGGTCACCTCGGCCGCAGCGATCGGCATGCGGAACCAGACCGCAGACCCGGCGACCAACTCGGGCGGCGCGTACATCTACGCCAAGGGCGGCCTGCTCTACGCCAAGCAGGGAGACGGCACCGTCTTCCAGGTGACTGCCGGAGGTGGCGGCGGAGGCGCTGTGCAGTCCGTCAACGGGAAGACCGGCGCGGTCGTCCTGGCCGCCTCCGACGTTGGGGCCCTGCCCACCTCGGGCGGCACCGCCTACTCGCTCAGCATGGACGGCGGCGCTGGCACGTACCGCGCCCTGAGCTGGAAGACTGGCGGCGCACTGCGCTGGGCCACTCAGGTCAACGACACTGCGGAGTCCGGCTCCGACGCTGGCTCGAACTTCGAGCTCACCGCGTGGGGCGACAACGGCGGCTACAAGGGCACGGCCATCTTCGCCGAGCGGGCCACGGCCCGCGTCGGCATCAACACCGGCAGCACGCTGGAGCCGGGCGCGGCCCTCACGGTCGGCGGCGAAACCAAGATCAACGGTAGAGTCACCGCGACGAAGGGCTTCACGGTCACCTCGACCGACGTGAACCAGAACCCGATCATCGTCGACACCCCGACCGGGCAGGCCGCACGGCTCCAGGTCATGCGCGTGAACGGCGTCGACCAGTTCTCGGTAGGTACGGACGGCTCCACGACGATCGCTGGCGGCCTGACCGCTGGCGGTACGAGCACGGTCCCGAACCTGCGTGTCGGCTCGTCCGGCTCCTTCGCTGGAGCCTCCGGCTCCATCATCGCCATGGCCAACGCCAGCACCCTCCCGAGCTCCAACCCGGCAGGCTCGATCCTCTACACCACGGGCGGCGTCCCGCGCTTCCGCGAGTCGAACGGAGCCGACTACGCCGTCACTCCGGTCAGCGAGTTCACCCCCGAGTCGCTGGGCGCCCTCGCATGGGCCGGCGACCCCGACAACTGCGCCTCCGGCTTCGACTACTGCGGCGTGGGCACCGGCCGCATGACGGCCGTCTACGTCAACCGCACCATGACGGTCTCGAAGATCATCTGGCACATGATGGGCTACGCGGGCGGCCTGCTGACCGGCTCCTGGGCCGGCATCTACAACACGTCCGGCACGCTCCAGCGAGCGACCGGCGACCTGTCCACTGCGGCGTACGAGCCCGCCGAGCAGCACTCGACCGGTGGCGGCTGGTCGTCGTCGAACCTGACGTCGGCCATCACACTGACGCCCGGCGTGTACTACATCCTCTGGCGGTTCAACTACACGGCCAGCCCGGTCGATGGTCCTGCGCTCGCACGCTACGAGAGTGCGGCTGCCTGCCAGTCCGTGATGGGCAACGGTGTCACCGTCTGGCGTCACGCCTCGTACTCGACGTCCGCCACGTCCGCGCCGTCGACCATCACGGTCGGCAGCTTCGGCCGCGACTCGATCCGGTTCTGGGTCGCGCTCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a94ef548d3a5725de3403705978ec0640d08add3d6660a3454b6e26764f2da97
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7380
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Streptomyces phage Sentinel Talcott,A.F., Ramsey,J., Moreland,R., Hernandez,I., Clark,J.D., Liu,M. and Burrowes,B. — — GenBank