Protein

View in Explore
Genbank accession
XAN60169.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MPTITVLVAPEVVRNKPETERLHTVTGTARGWEKTSLNQDPDEILTECKGLDALLTKSNLQADGVTKVDPTKPVGFQLSYEIHDPSAVLTTGLTITPETANGEVGQVVELKAVVAPENATYQGVNWYSGDLTKAVHIGGGKFKLLAPGSVTVYGVTIEGDHTDSTVITVAGALSLSTDLAASQDVTTGESATFTIAATGGTTPYTHTWYFSDVPGGEGEVIDAGTNPTAATASLVITTVAAENEGEYWCVVEDADGHSVTSTRCEMAAV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 28055,82240 Da
isoelectric point:4,40897
aromaticity:0,05576
hydropathy:-0,06431

Domains

Domains [InterPro]
DC_0078
STR
1–193
DC_0078
IPR003343
STR
91–158
IPR003343 IPR007110
DC_2066
RBD
167–269
DC_2066
IPR003599
STR
180–269
IPR003599
PF13927
STR
182–252
PF13927
cd00096
STR
191–262
cd00096
XAN60169.1
1 269
Architecture
STR
STR 1-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LHE287
[NCBI] 		3144838 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAN60169.1 [NCBI]
Genbank nucleotide accession
PP761450.1 [NCBI]
CDS location
range 22307 -> 23116
strand +
CDS
ATGCCAACGATCACTGTATTAGTAGCACCGGAAGTTGTTCGCAACAAACCGGAAACTGAGCGTCTTCACACTGTAACAGGTACTGCTCGGGGTTGGGAAAAGACCAGTCTTAACCAAGACCCAGACGAGATCCTGACTGAGTGTAAAGGTCTGGATGCACTGCTGACCAAGAGCAATTTGCAGGCCGATGGCGTCACCAAAGTGGATCCAACCAAGCCCGTTGGCTTCCAGCTGTCTTATGAAATCCACGACCCAAGCGCTGTACTGACCACTGGCCTGACCATCACCCCTGAAACTGCTAATGGTGAAGTCGGTCAGGTTGTTGAACTGAAGGCGGTCGTCGCTCCGGAGAACGCGACCTACCAGGGTGTCAACTGGTACTCTGGCGATCTGACCAAAGCTGTGCACATCGGTGGTGGTAAATTCAAGCTGCTGGCGCCGGGTTCAGTGACTGTTTACGGTGTAACCATCGAAGGTGACCACACTGACTCTACCGTCATCACAGTGGCTGGTGCTCTGTCTCTGTCTACCGATCTGGCTGCTTCTCAGGATGTAACAACAGGTGAATCCGCAACCTTCACCATCGCTGCTACAGGCGGCACTACCCCATACACACATACTTGGTACTTCTCTGATGTCCCTGGTGGTGAAGGTGAGGTGATCGATGCTGGCACTAACCCCACTGCTGCAACTGCGAGCCTGGTTATCACTACAGTTGCTGCCGAAAACGAGGGTGAGTACTGGTGTGTTGTTGAAGACGCTGACGGCCACTCTGTGACCTCTACTCGTTGCGAAATGGCTGCGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2a2daf5d775f13f1168c44a4d855e9455f6a1512a72de927d6af86bff7f3e378
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7245
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Escherichia coli phage LHE287 Xu,S. 2017-10-19 — GenBank