Protein

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Genbank accession
XYY22239.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MELPAEFTMLTVIKVENPKWSSADHVQIDCDLTVKFPGSDVEETIPFTACPWDTFSDHCAPIFEYAAALSGIVEYERPAVTADDLQVEFDKIWPDVLLGLADQATIDLAKNLRIQIKAMQE
Physico‐chemical
properties
protein length:121 AA
molecular weight: 13544,25400 Da
isoelectric point:4,20963
aromaticity:0,09091
hydropathy:0,00413

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Ppr_SeaD2
[NCBI] 		3446273 No lineage information
Host Pseudomonas protegens Pf-5
[NCBI] 		220664 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas protegens

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYY22239.1 [NCBI]
Genbank nucleotide accession
PV763892.1 [NCBI]
CDS location
range 16712 -> 17077
strand +
CDS
ATGGAACTTCCTGCTGAGTTCACCATGCTGACCGTGATCAAAGTCGAGAATCCTAAGTGGTCCTCGGCTGACCACGTACAGATTGACTGCGACTTGACCGTGAAGTTCCCCGGCTCTGATGTGGAGGAAACAATTCCCTTCACTGCGTGCCCGTGGGATACTTTCTCGGATCACTGCGCACCGATCTTTGAGTACGCCGCAGCACTGTCGGGCATCGTCGAGTACGAGCGCCCCGCTGTTACTGCGGACGACCTCCAAGTCGAGTTCGACAAAATCTGGCCTGACGTTCTGTTGGGCCTCGCCGACCAAGCCACCATTGACTTGGCCAAAAACCTCCGCATTCAAATTAAGGCGATGCAAGAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
15a073337380dcfc6c922180897083fdb520a036f859374067114ae6aca399c2
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8655
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Pseudomonads coordinate innate defense against viruses and bacteria with a single regulatory system Brinkley,D.M., Bertolli,S.K., Gallagher,L.A., Tan,Y., Motha de Silva,M., Brockman,A., Zhang,D., Peterson,S.B. and Mougous,J.D. — — GenBank