Protein

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Genbank accession
WYX90307.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,80
Protein sequence
MFNIYIVNKDNNCVYFENCYVSTVDFSLDKSVPILNVGIESGKFSEVSTFTPAGSIVQGEVMSYSPPRVSTNSNVLPALLSASMSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATIAFYYTKRFAGDMFYNIEPETDIPLTIRNGHISIDFPSARITKRLQFSDIYRVEWDVIPTADSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:196 AA
molecular weight: 22347,99220 Da
isoelectric point:5,06614
aromaticity:0,13265
hydropathy:-0,21224

Domains

Domains [InterPro]
IPR056389
ATT
1–195
IPR056389
WYX90307.1
1 196
Architecture
ATT
ATT 1-195 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WYX90307.1
1 196
Domain Start End Length (AA) Confidence
N-terminal 1 182 182 0,3849
Central domain 183 185 4 0,7218
C-terminal 186 196 10 0,6527
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-182
Central
183-185
C-terminal
186-196

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage KKP_3822
[NCBI] 		3027681 Uroviricota > Caudoviricetes >
Host Salmonella enterica subsp. enterica serovar Manchester
[NCBI] 		915158 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYX90307.1 [NCBI]
Genbank nucleotide accession
OQ674104 [NCBI]
CDS location
range 22433 -> 23023
strand +
CDS
ATGTTTAATATATACATAGTTAATAAAGATAATAACTGTGTGTACTTTGAGAATTGCTATGTATCTACTGTAGACTTTTCTCTAGACAAAAGCGTTCCTATCCTAAACGTAGGAATTGAATCTGGTAAGTTCTCTGAGGTGTCTACTTTTACTCCTGCTGGTTCTATTGTTCAGGGTGAAGTTATGTCATATAGTCCTCCTAGAGTATCTACCAACAGTAATGTTTTACCAGCTCTTTTATCCGCTTCTATGTCATTCCAGCAACAATGTTCTTGGAGAGAAGATAAAAGCGTATTTGACATAAACAAAATATATAATAATAAGAGAGCTTATGTTAATGAAATGAATGCTTCGGCAACAATTGCATTTTACTACACTAAGCGATTTGCTGGTGATATGTTTTATAATATTGAACCCGAAACTGACATACCATTAACCATCCGAAATGGACATATTTCGATTGACTTTCCTTCAGCACGTATAACAAAACGCCTACAATTCTCGGATATATACAGAGTTGAATGGGATGTAATCCCTACTGCAGACTCTGATCCGGTAAGAATCGACTTCTTTGGAGAAATAAAGAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4b9d09ca92470331fc80900eb241a6719ab1077b344126d08e777cc0a56e0622
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7774
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly Isolated Salmophages for Biocontrol of Salmonella in Ready-To-Eat Plant-Based Food Wojcicki,M., Swider,O., Srednicka,P., Ilczuk,T., Koperski,L., Shymialevich,D., Cieslak,H., Sokolowska,B. and Juszczuk-Kubiak,E. 2013 — GenBank