Protein

View in Explore
Genbank accession
CCI88342.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MQQGTIMDTDEVESNNSVIGVSLGFTNKNLRTGYQIRIIGLYVKEEGQENDFLYAVTTAITPEYMPSFADKVLYRFNMQMYLVIGNAQSVNVVINDGTAVTHGQLNKYKAEVTENLKNLENTHKEDMSHVAKSASVNGGAEILPDSTGKLNLVVPDPDLSKYVSLEQLGELLKAKANAADVYTKKETDLRLAQAGKVKSVNGNLPDQDGDVHVPSYAPNLLLGTQSKPKTVEMVHWSANADQYSIDPSIDLSGQKVTVSIKLAKSTNDAMVVLQYTDSTGAWQFQTGNVIPAGNTGYSTVTQVLPANVKNIGVRPSWTTGTAKGTCTYSEAKLAVWKSADLPPDMTWLPNEADKANTSDVYTKAEVNSKTSGTVVTDYDIADKRPTTVTDSYTKKWLVDQNALGAFADQINQLKGNYLAWKSDLDSLQNNVYTKSDIDGKVNISSNLFRQIQNSNNWKDIFGVYNPNKVLTSLRIDPGGTGPLINNYAAGIGFGGVDTKGVLSVDYYNHQARITGGNGDKPVWSEDIAWKSDVNDLRNQVQQLKDNQFEVQTFTDATAAASWEAQRPGKRMAIVNQ
Physico‐chemical
properties
protein length:576 AA
molecular weight: 62971,56170 Da
isoelectric point:5,28775
aromaticity:0,07812
hydropathy:-0,45503

Domains

Domains [InterPro]
DC_2008
STR
1–240
DC_2008 Coil
Coil
Unmapped
102–125
Coil
CCI88342.1
1 576
Architecture
STR
STR 1-240 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage phiAQ113
[NCBI] 		1206110 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Lactobacillus helveticus
[NCBI] 		1587 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCI88342.1 [NCBI]
Genbank nucleotide accession
HE956704 [NCBI]
CDS location
range 17301 -> 19031
strand +
CDS
ATGCAACAGGGAACCATCATGGACACTGACGAAGTTGAAAGCAATAACTCAGTGATTGGTGTTTCTCTGGGCTTTACTAATAAAAATTTAAGAACTGGTTATCAAATTAGAATTATCGGTCTCTACGTTAAAGAAGAGGGACAAGAAAACGATTTTCTTTATGCTGTAACCACTGCGATTACCCCAGAATACATGCCTAGTTTCGCAGATAAAGTGTTATATCGCTTTAACATGCAGATGTATTTAGTCATTGGCAATGCGCAATCGGTAAATGTTGTTATTAATGATGGTACTGCCGTAACTCACGGGCAACTTAATAAGTATAAAGCTGAGGTAACTGAAAACTTAAAGAATCTTGAAAATACTCACAAAGAAGATATGAGTCATGTTGCTAAGAGCGCAAGTGTAAATGGTGGGGCTGAGATCTTACCTGACAGTACTGGAAAGTTGAATTTAGTTGTTCCAGATCCTGATCTATCTAAATATGTAAGTCTTGAACAATTAGGGGAGTTACTTAAAGCCAAAGCTAATGCTGCTGATGTGTATACCAAGAAAGAAACTGACCTAAGACTTGCACAAGCAGGTAAGGTAAAGTCCGTCAATGGCAATTTACCAGACCAAGATGGGGATGTGCACGTCCCTTCCTATGCACCCAACCTATTACTAGGAACCCAAAGCAAGCCTAAAACTGTTGAGATGGTTCATTGGTCAGCTAATGCAGATCAATATTCAATAGACCCAAGTATAGATTTGTCAGGGCAGAAAGTGACAGTAAGTATTAAGCTTGCTAAGTCTACCAATGACGCAATGGTTGTTTTGCAATATACTGATTCAACAGGTGCATGGCAATTCCAAACGGGCAATGTTATCCCAGCAGGAAATACTGGCTATTCTACTGTAACTCAGGTACTTCCAGCCAACGTCAAAAATATAGGTGTAAGACCTTCCTGGACTACTGGCACTGCAAAAGGAACCTGTACTTATAGTGAAGCAAAATTGGCTGTATGGAAGTCAGCAGACTTGCCACCTGACATGACTTGGTTACCTAATGAAGCAGACAAAGCTAATACATCTGATGTGTATACCAAGGCTGAAGTCAACAGCAAGACTTCAGGCACGGTCGTTACTGATTACGACATTGCAGATAAGAGACCAACCACGGTAACAGATAGCTACACAAAAAAATGGCTAGTTGACCAAAATGCGCTCGGGGCGTTTGCTGACCAAATTAATCAGCTAAAAGGGAACTATCTAGCATGGAAGAGCGACCTCGATAGCTTGCAAAACAATGTCTATACAAAGTCCGACATTGACGGCAAGGTAAATATCAGTAGCAATTTGTTCCGACAGATTCAGAACTCAAACAACTGGAAGGACATTTTCGGCGTTTATAATCCTAACAAAGTACTTACGTCTCTTCGAATTGATCCCGGCGGTACCGGTCCATTGATAAATAATTATGCGGCAGGTATTGGTTTTGGTGGTGTTGACACCAAGGGTGTTTTGTCAGTTGACTATTACAACCATCAAGCACGTATCACAGGTGGTAATGGTGATAAACCAGTTTGGAGTGAAGACATCGCTTGGAAATCAGACGTTAACGATCTACGCAACCAAGTGCAACAATTAAAAGACAACCAGTTCGAAGTCCAGACGTTCACGGACGCTACAGCAGCGGCGAGCTGGGAAGCACAGAGACCAGGAAAAAGAATGGCAATAGTAAATCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
eea04a0b8a69737da2cdddc9bd4e100d219d39e9d1293910695027eef48d2554
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7519
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of the genome of the dairy Lactobacillus helveticus bacteriophage {Phi}AQ113 Zago,M., Scaltriti,E., Rossetti,L., Guffanti,A., Armiento,A., Fornasari,M.E., Grolli,S., Carminati,D., Brini,E., Pavan,P., Felsani,A., D'Urzo,A., Moles,A., Claude,J.B., Grandori,R., Ramoni,R. and Giraffa,G. 2013 23728811 GenBank