Protein

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Genbank accession
XQO35296.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MHFRLYNRPAAFNKKTGGGTMWIDGVYEDYDAGEPYEGRVQIHGSVGLMKVEILDGNLPPSASVFIDQLTKEVVVKWSKYTPPTSEVKGVPNGDFENNSFWELIGPGTPATVETGWSPNNKGNLTYRDQKGEYIVRGAWAPVSSVNRNINITAKVDHGKSSKGNASCAIGLAWYDAERNLVREDWGNAVTNGGKGRWYDTKLMQASSDRLIKFVRPAIKFVRKKQNHPIHIGQVEWDHVYEVGYNEDEELWVLVKVTDSVHNTATHRGVIEENNIWLTSRPYPFIERDTFSSVGPILYDPVFKDDALGYGSDMATTSIQFGVTFKSVLADYTFPDYATTDLSVSVEMKDVMRPMSLVDNVSSRVGSVVVDMRRIAVDPGVEYSNATTSISMGVTLQ
Physico‐chemical
properties
protein length:396 AA
molecular weight: 44126,04480 Da
isoelectric point:5,57832
aromaticity:0,10354
hydropathy:-0,38535

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XQO35296.1
1 396
Domain Start End Length (AA) Confidence
N-terminal 1 208 208 0,3793
Central domain 209 385 178 0,1329
C-terminal 386 396 10 0,0468
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-208
Central
209-385
C-terminal
386-396

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS_YA1
[NCBI] 		3410946 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XQO35296.1 [NCBI]
Genbank nucleotide accession
PV224507.1 [NCBI]
CDS location
range 5177 -> 6367
strand -
CDS
ATGCACTTCCGTCTCTACAACCGACCAGCGGCCTTCAACAAGAAGACCGGTGGCGGGACCATGTGGATCGACGGCGTATACGAAGACTACGACGCAGGCGAGCCTTACGAGGGACGCGTGCAGATTCACGGCTCCGTAGGTCTGATGAAGGTCGAGATTCTGGACGGTAACCTGCCGCCCAGCGCCTCGGTCTTCATCGACCAACTTACTAAGGAAGTCGTGGTGAAGTGGTCGAAGTACACCCCGCCGACTTCTGAGGTTAAGGGGGTCCCCAACGGGGACTTTGAGAACAACTCGTTTTGGGAATTGATCGGGCCCGGTACACCGGCGACGGTCGAGACCGGCTGGTCACCGAACAACAAGGGTAACCTGACGTACCGGGACCAGAAGGGCGAGTACATCGTTCGCGGAGCGTGGGCACCTGTGTCCAGTGTTAACCGCAACATCAACATCACGGCCAAGGTAGATCACGGCAAGTCCTCTAAGGGTAACGCCTCGTGCGCCATCGGCCTTGCGTGGTACGACGCGGAGCGTAATCTGGTCCGTGAGGATTGGGGCAACGCTGTGACAAACGGCGGTAAGGGTCGTTGGTACGACACAAAGTTGATGCAGGCGTCAAGTGATCGCCTTATCAAGTTCGTTCGACCGGCCATCAAGTTCGTCCGAAAGAAGCAGAACCACCCGATCCACATTGGTCAGGTTGAGTGGGACCACGTGTACGAGGTTGGATACAACGAGGACGAGGAACTGTGGGTACTGGTCAAGGTCACGGACTCTGTGCATAACACTGCGACCCATCGCGGTGTGATTGAGGAGAACAACATCTGGTTGACCTCCCGCCCGTATCCGTTCATCGAGCGGGACACGTTCTCTAGCGTTGGTCCTATCCTGTACGATCCGGTCTTCAAGGATGACGCTCTAGGCTATGGATCAGACATGGCGACCACTTCGATTCAGTTCGGAGTCACCTTCAAGTCTGTACTGGCTGACTACACCTTCCCCGACTACGCGACTACCGATCTCTCGGTGTCAGTAGAAATGAAGGACGTGATGCGTCCGATGTCCCTTGTAGATAACGTAAGCTCGCGCGTTGGTTCTGTGGTTGTTGACATGCGACGAATTGCGGTAGACCCCGGCGTCGAGTACAGCAACGCAACCACTAGCATTTCCATGGGAGTAACCTTGCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d4fdfda66d8baa6efe74547ef34213635cc469b9258834885b1c6da90cf8da50
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6203
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50