Protein

Genbank accession
AKO62166.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MTKKPWRAGKDLSAVVENMEIGTGQRGDGRHAFVTREELVSLKLARRRTSGGASYALNPGVDIDSTLMVVDFPTKPLNFKVTGGFGSVLLEWDMPNYRGHSLTEIWRGTEDDLADAVLVATTPGQVYGDPVDPGWSGFYWIRFVNAAGVKGPWNGEKGTQAQTQIGVKAIIDQIRDEAAKSPVVSELRKEIKNAQGQAVKDAAIKTTEVVGTLREETTRTIGGIETRISTLDSSTSESLNEVDKRITKLDKEGGEAFLAMWSKKAGVDGITAGIGIVAGKDGEGRPVSQVAISASQLFVFDPNNPDNTAYPFAVSGGKVVIPKAMIYDAVIETLVSRKVVADEVKAGVSITSPVIRSAVIQNGNFQVDSQGNLNIGGLFSVTSQGQLTIRYSNQNVGLVIRNDKIEVYDQNGRLAVRIGRLR
Physico‐chemical
properties
protein length:422 AA
molecular weight: 45421,86170 Da
isoelectric point:7,76815
aromaticity:0,06398
hydropathy:-0,22986

Domains

Domains [InterPro]
IPR015406
256–333
IPR015406
AKO62166.1
1 422
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Ss-VASD
[NCBI] 		1675531 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shigella sonnei
[NCBI] 		624 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Shigella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKO62166.1 [NCBI]
Genbank nucleotide accession
KR781488.1 [NCBI]
CDS location
range 47308 -> 48576
strand +
CDS
ATGACAAAAAAACCGTGGCGCGCAGGAAAAGATTTATCTGCGGTTGTGGAGAATATGGAGATTGGGACAGGACAGCGTGGCGACGGTCGTCATGCTTTTGTAACCCGTGAAGAACTGGTCAGTCTGAAGCTGGCCCGTCGTCGGACTTCAGGTGGTGCCTCATATGCACTGAATCCGGGTGTTGATATTGACAGTACCTTAATGGTTGTTGATTTTCCCACAAAACCGCTGAATTTTAAGGTGACTGGAGGATTTGGCTCAGTTCTTCTGGAATGGGATATGCCAAATTATCGGGGACACTCACTGACTGAAATCTGGCGGGGTACGGAAGATGACCTTGCGGATGCGGTACTGGTTGCCACGACGCCGGGGCAGGTTTACGGCGATCCGGTTGACCCTGGCTGGTCGGGATTTTACTGGATACGTTTTGTTAACGCGGCAGGAGTGAAAGGTCCATGGAATGGTGAAAAAGGCACACAGGCACAAACACAGATCGGTGTGAAGGCCATCATTGACCAGATCCGCGATGAGGCTGCAAAGTCGCCGGTTGTGTCCGAGTTGCGTAAAGAAATAAAAAACGCGCAGGGGCAGGCTGTAAAGGATGCTGCAATTAAGACAACCGAAGTTGTAGGGACTCTCAGGGAAGAAACGACAAGAACGATTGGTGGTATTGAAACCCGCATTAGCACACTGGATTCGTCAACCAGTGAATCGCTTAATGAGGTCGACAAGCGTATCACTAAACTGGATAAAGAAGGCGGTGAAGCTTTTCTTGCGATGTGGTCAAAAAAAGCGGGGGTTGATGGTATCACTGCGGGGATCGGGATTGTCGCCGGAAAAGACGGTGAAGGCAGGCCTGTAAGTCAGGTTGCAATTTCTGCGTCGCAGTTGTTTGTCTTTGACCCGAATAATCCGGATAACACAGCCTATCCGTTTGCGGTATCAGGTGGCAAGGTAGTGATCCCGAAAGCGATGATTTATGACGCGGTGATTGAAACACTGGTGTCGCGGAAGGTTGTGGCGGATGAGGTAAAAGCCGGGGTAAGTATCACTTCGCCAGTTATCCGGAGTGCCGTTATTCAGAACGGAAACTTTCAGGTTGATTCTCAGGGTAACCTGAATATTGGAGGCCTTTTCAGTGTTACGTCACAAGGGCAACTGACAATTCGTTACTCTAATCAGAATGTAGGACTGGTGATCCGCAATGATAAAATTGAGGTTTATGATCAGAATGGACGACTGGCTGTTCGCATAGGCAGATTACGCTGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
c3f086a11742cd584c80e4f8e1d3ad808c637fd298b78602a651b7df54361259
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6989
Evidence 0,6989
Download PDB

Literature

Title Authors Date PMID Source
A novel Shiga Toxin 1a Converting Bacteriophage of Shigella sonnei with Close Relationship to Shiga Toxin Expressing Escherichia coli Carter,C.C., Fierer,J., Chiu,W.W., Strain,M. and Mehta,S. 2015 — GenBank