Protein

View in Explore
Genbank accession
VUF56045.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,86
Protein sequence
MADLKVGSTVGGSVIWHQGNFPLNSAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTKSGGFQKEVEFKEGVKISATFSNGSDLNGLYSGNGDGASREKANMDLHSWYGIGIWNTCTGDGIQGRTIWFNARRGTIETVGDIVSGRQVISNASVPTGPAHLTRKDYVDGAINTVTTNANSRVLRSGDTMTGNLTAPNLFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
Physico‐chemical
properties
protein length:229 AA
molecular weight: 24613,83880 Da
isoelectric point:6,41294
aromaticity:0,09607
hydropathy:-0,46856

Domains

Domains [InterPro]
DC_0466
STR
1–227
DC_0466
IPR005601
STR
77–203
IPR005601
VUF56045.1
1 229
Architecture
STR
STR 1-227 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VUF56045.1
1 229
Domain Start End Length (AA) Confidence
N-terminal 1 205 205 0,2545
Central domain 206 218 14 0,0654
C-terminal 219 229 10 0,9397
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-205
Central
206-218
C-terminal
219-229

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage T4_ev240
[NCBI] 		2742945 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VUF56045.1 [NCBI]
Genbank nucleotide accession
LR597657 [NCBI]
CDS location
range 153624 -> 154313
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACTGTGGGTGGATCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATTCAGCCGGTGACGATGTACTCTACAAATCATTTAAAATATATTCAGAATATAATAAACCACAGGCAGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGCACAAAGTCTGGAGGTTTCCAAAAAGAAGTAGAATTTAAAGAAGGCGTTAAAATTTCTGCAACGTTTTCTAATGGTTCAGACCTGAATGGGTTATATTCTGGCAATGGAGATGGAGCTTCCAGAGAAAAAGCTAACATGGATTTACATTCATGGTACGGCATTGGTATTTGGAACACATGCACAGGTGATGGGATCCAGGGACGCACAATCTGGTTTAATGCCAGGCGTGGTACAATTGAAACAGTTGGCGATATTGTTTCGGGCCGACAAGTTATTTCTAATGCTTCAGTACCGACCGGCCCAGCACACTTAACTCGCAAAGATTATGTCGATGGAGCAATAAATACTGTTACGACAAATGCAAACTCTAGAGTGTTACGATCTGGTGACACCATGACAGGAAATTTAACTGCGCCAAACCTTTTTTCACAGAATCCTGCATCTCAACCTTCACACGTTCCACGATTTGACCAAATCGTGATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d5b0a3e97a869325c1b5c11f79ca7dcb1a9f20223f272276b2d5b6932442061d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6625
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50