Protein

View in Explore
Genbank accession
ATI16208.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,64
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDVWVETETYPVGALVKVNADNMLYRCLVQNINMPPSANPTQWRPVLDLTAATAAARQVGKASGNVIQVGAFGLGGNAEVVTNANSIVNDGIYQLPASGTGGPTNGVETEILHINWDEKNASQWGRTKGKRVIAMREKVNNTWGEWSYSYGPDNKPTASELGINQDFIPMDGSDSIRGNLGTVGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVVTAARWGSVPMSHIQHILVAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGNKKELRGGTYWSAPLQYYINGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47398,55350 Da
isoelectric point:6,32552
aromaticity:0,07883
hydropathy:-0,19189

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ATI16208.1
1 444
Domain Start End Length (AA) Confidence
N-terminal 1 225 225 0,7319
Central domain 226 424 200 0,0476
C-terminal 425 444 19 0,9993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-225
Central
226-424
C-terminal
425-444

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SenM_PA13076
[NCBI] 		2029636 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ATI16208.1 [NCBI]
Genbank nucleotide accession
MF740800.1 [NCBI]
CDS location
range 47106 -> 48440
strand -
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCCGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTCGAGGCTGGGGTGCGACCCTTGGCTACTCAGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATCGGTAACCGTACTGACAAAGGTATCCACTACATCCTTCAGCAGGGTGTTGATGTATGGGTAGAAACTGAGACCTACCCGGTTGGTGCACTGGTTAAAGTTAACGCCGACAATATGCTGTACCGTTGTCTGGTGCAGAACATTAATATGCCACCGTCTGCTAACCCTACACAGTGGCGCCCTGTACTTGACCTGACTGCTGCAACTGCTGCAGCACGACAGGTTGGTAAAGCCTCTGGTAACGTAATCCAGGTCGGTGCATTTGGCTTAGGTGGCAACGCTGAGGTAGTTACTAATGCTAACAGCATTGTAAACGACGGTATCTACCAGCTTCCAGCGTCAGGTACGGGCGGACCTACTAACGGTGTTGAGACTGAGATTCTGCATATCAACTGGGATGAGAAAAACGCTTCACAGTGGGGACGCACCAAGGGTAAGCGCGTAATAGCCATGCGCGAGAAGGTTAATAATACCTGGGGCGAATGGTCGTACTCTTACGGGCCTGACAATAAACCTACTGCCTCTGAGCTGGGTATTAATCAGGACTTCATCCCTATGGATGGTTCTGACTCAATACGCGGCAACTTAGGTACTGTCGGCTGGCTGCATATCGCACGTACTACTTCCGACTTGCTACGTGCTGCTAACTCTGCCGGTGTAGGTACTGTTGAGTACTCTGGCAACATCGCAGGTGGTACTGCTGTTCAGGAGTTGCTTACTTCAGTTTCTGTCGCGGCTAACAGTAATGTTGTCACTGCTGCTCGCTGGGGATCTGTACCTATGTCGCACATCCAGCACATCCTTGTTGCTGGCGGTGCTACCCAAATTAACATGGCGGTATGTCGCCCTGGTGGTATTGCCGACCGCCGTACAGTAGCTTTGCAGGTGGATGGCCTTAACAGCCGAGTAACTACCACAAATAGCTTTATTTTATGCGAGAATGGTGTTAGAGTATATTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTCGGCGCTCGTATTGCTGCTGGTGTATCCGAGTCAACGTTCTACCCTGGGCATGTAATGACTGGCTGGCGCTTCGGCAATAAGAAAGAGCTGCGCGGTGGTACATACTGGTCAGCGCCGTTACAGTATTATATCAACGGCACTTGGATTAACGTAAGCAACGTATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16e6959e47b28e46a0e3b35e9601faa7234c382c251cc46bc67bbbeb1d022979
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6674
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation characterization and comparative genomic of novel bacteriophage for salmonella Bao,H., Shahin,K., Molineux,I.J. and Zhang,H. 2011-10 — GenBank