Protein

View in Explore
Genbank accession
WAK44960.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,75
Protein sequence
MSDSPLTLNLVGTIYQGPPGNNGDPGKSSYESYTETTTDNPVLSEADWIKSLVGKPGEPGDSAYMSYVKTTSDNPVKTESAWVASLKGNPGDSIKGDPGKSSYQSYLDTTSDNPKLTEAQWVESLHGADGKDGTGLNNRQAWATGTTYSPGDYVFADNADGNNSMWILSGTEDYVSTVQPKDDLTHWIEFQAPAGNNGVGLASLVMTYQASTSGTSVPTGTWATTIPAVAKGSFLWTRSTYTLTDDTIAYGYSAAYQGVDGTNGNNGRGVSSATVTYQASASGTTTPTGTWSSTVPAVTKGQFIWTRTITAYTDALNPTTAYSVAYFGTDGSAGVGVSSAVTTYQVGTNGTTAPTGTWSSTIPTVAQGSFLWTRTVLTLTDASTNTAYSVAYQGVDGSGGSGSGGTTWLNGTSDPTSSTGAAGNYYQNTSTFVVWYRATTSWAAIGVIMPIATTQQAKDATSNLVLMTPAHVREYMEQYGLTATYTTQATDLNLVVRGAFFNYSGAASGGTANIPATGTYGRGFCIPSGDGYATQFAIENDTGKCYVRFQTAGTWQTTWTLVGPSSGGGGGGTSIPAAYMPADANSISSTAAVSLGFTGTVLPVNNTLYMFKAVILTQGAVGGSFNITFDNMGAQVFRMSAVSADSTGVLKRTTSDQAATGLLVYTGATQEGIAVLEGVIQFNYVGTTPPQLKAMVVNSSYWLNILKTSSYTLTPIAAISS
Physico‐chemical
properties
protein length:721 AA
molecular weight: 74942,39450 Da
isoelectric point:4,56533
aromaticity:0,10264
hydropathy:-0,18225

Domains

Domains [InterPro]
DC_1328
STR
28–267
DC_1328 DC_1328
DC_1328
STR
256–334
DC_1328 cd19958
WAK44960.1
1 721
Architecture
STR
STR 28-718 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage Fifi067
[NCBI] 		2996065 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAK44960.1 [NCBI]
Genbank nucleotide accession
OP829055 [NCBI]
CDS location
range 43129 -> 45294
strand -
CDS
ATGAGCGACAGCCCATTGACTCTAAACCTGGTAGGTACTATCTACCAGGGGCCACCAGGCAACAACGGCGATCCTGGTAAATCGTCATACGAGTCATATACAGAAACCACTACAGATAATCCGGTACTCAGCGAAGCTGACTGGATTAAATCTCTGGTGGGTAAACCAGGTGAGCCTGGTGATTCTGCCTATATGTCTTATGTGAAGACTACCAGCGATAACCCAGTGAAAACTGAGTCTGCTTGGGTGGCTTCCCTTAAAGGTAATCCTGGGGACTCTATTAAAGGGGATCCAGGGAAATCAAGTTACCAATCCTATCTGGACACGACCAGCGACAACCCTAAGCTGACTGAAGCTCAATGGGTGGAGTCACTGCATGGTGCTGATGGTAAAGACGGTACTGGCTTGAATAACCGTCAGGCTTGGGCCACTGGCACAACCTATTCACCTGGTGATTACGTGTTTGCGGATAACGCAGACGGTAACAACTCCATGTGGATTCTGTCCGGTACTGAGGATTATGTTTCGACTGTTCAGCCGAAAGATGATCTGACCCACTGGATTGAGTTCCAGGCTCCTGCCGGGAACAACGGTGTTGGCCTGGCCTCTCTGGTCATGACTTATCAGGCATCGACGTCCGGTACTTCCGTTCCTACGGGCACTTGGGCGACGACTATCCCTGCCGTGGCTAAAGGATCCTTCCTTTGGACTCGCAGCACTTATACCCTGACCGATGACACTATCGCGTATGGTTACAGTGCAGCCTATCAGGGTGTGGATGGAACCAATGGGAATAACGGTCGAGGTGTCAGCTCTGCAACGGTGACGTATCAGGCTTCAGCATCAGGCACCACTACCCCAACAGGTACTTGGTCTTCAACTGTACCTGCTGTGACCAAAGGACAGTTCATCTGGACTCGTACCATAACTGCCTATACGGACGCCCTTAACCCGACGACAGCGTACAGCGTTGCCTACTTTGGTACGGATGGTTCTGCTGGTGTGGGTGTCAGTTCTGCTGTTACCACTTATCAGGTGGGAACCAATGGAACGACTGCACCAACCGGAACTTGGTCAAGTACCATTCCGACTGTGGCTCAGGGTTCATTCCTGTGGACTCGTACTGTTCTGACACTGACCGATGCGTCAACCAACACTGCTTACAGTGTGGCGTATCAAGGTGTTGATGGTTCTGGTGGATCAGGCTCCGGTGGCACCACTTGGTTGAACGGTACTTCCGATCCAACCAGCTCGACGGGTGCTGCTGGTAACTACTACCAGAATACCTCGACCTTTGTGGTTTGGTATCGTGCCACTACGAGCTGGGCTGCTATTGGTGTGATTATGCCAATTGCCACTACCCAGCAAGCGAAAGATGCAACCAGTAACTTGGTGCTGATGACACCTGCTCATGTGCGTGAGTACATGGAACAGTATGGTCTGACTGCCACTTACACCACTCAGGCAACTGACCTGAACTTGGTTGTTCGTGGAGCATTTTTCAACTATTCCGGTGCTGCTTCTGGTGGTACGGCGAACATTCCAGCGACCGGAACTTACGGTCGTGGGTTCTGTATCCCGTCCGGCGATGGTTATGCCACACAGTTCGCAATCGAAAACGACACTGGCAAATGCTATGTGCGTTTCCAGACTGCTGGAACCTGGCAGACAACATGGACACTGGTTGGCCCGTCTTCGGGTGGTGGTGGCGGTGGTACAAGCATTCCGGCTGCATACATGCCTGCCGATGCAAATAGCATCAGTTCAACTGCTGCTGTATCTCTGGGCTTCACAGGTACTGTGCTGCCAGTGAACAACACGCTGTACATGTTCAAAGCTGTGATCCTGACTCAGGGTGCCGTTGGTGGCTCATTCAACATCACGTTTGACAATATGGGTGCTCAGGTATTCCGTATGTCTGCCGTGTCTGCTGACAGCACTGGTGTTCTGAAACGTACCACATCTGATCAGGCTGCAACTGGCCTGCTGGTTTATACCGGGGCAACTCAGGAAGGTATCGCTGTTCTGGAAGGTGTGATTCAGTTCAACTATGTGGGAACCACACCACCTCAGCTTAAAGCTATGGTAGTGAACTCCTCATACTGGCTGAACATCCTGAAGACCAGTAGTTACACACTGACGCCAATTGCGGCTATCAGCTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c9b1d6cc79ceb0c281260e825e4089b71dd2e915dc2bf429ed3ff3802620986d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7736
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete gehome sequence of Erwinia bacteriophage Fifi067 Kim,S.G. and Roh,E. 2012-09-15 — GenBank