Protein

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Genbank accession
WPK28658.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MEGQTFDAGLYPKLAAVYPSGSLPDMRGQTIKGKPSGRAVLSTEADGVKSHSHSASASNTDLGTKTTSSFDYGSKTTSSFDYGTKTSNTTGNHNHTVSGNTSSAGAHQHARSGPQVRADISNNIFYDGYNSVGANADAKFTGTVNGATASSNMAKTSSDGAHTHSWSGTTSATGNHAHTVGIGAHTHSVGIGAHSHTVAIGSHGHTITVNATGNTENTVKNVAFNYIVRLA
Physico‐chemical
properties
protein length:231 AA
molecular weight: 23607,12110 Da
isoelectric point:8,81214
aromaticity:0,06061
hydropathy:-0,52165

Domains

Domains [InterPro]
IPR051934
Unmapped
1–231
IPR051934
IPR037053
ATT
1–32
IPR037053 IPR005003 IPR005003 SSF88874
DC_0310
STR
1–231
DC_0310
SSF88874
STR
2–103
SSF88874 IPR005003 IPR005003
WPK28658.1
1 231
Architecture
ATT
STR
ATT 1-32 | STR 33-231
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WPK28658.1
1 231
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0008
Central domain 11 209 200 0,0229
C-terminal 210 231 21 0,9983
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-231

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_EP32a
[NCBI] 		3090671 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK28658.1 [NCBI]
Genbank nucleotide accession
OR544954.1 [NCBI]
CDS location
range 26322 -> 27017
strand -
CDS
ATGGAAGGTCAAACATTTGATGCTGGCTTGTATCCTAAGTTAGCTGCGGTGTATCCTTCCGGCTCTCTGCCTGATATGCGTGGGCAAACGATTAAAGGTAAACCATCTGGGCGTGCTGTATTAAGTACAGAAGCAGACGGTGTTAAGTCACATAGCCATAGTGCAAGTGCATCAAACACAGATTTGGGTACTAAGACCACGTCTAGTTTTGATTACGGTAGCAAAACGACTTCAAGCTTTGATTATGGTACTAAGACCAGTAATACCACTGGCAACCATAACCATACAGTGAGTGGTAATACTAGTTCCGCAGGAGCTCACCAACACGCGCGTTCAGGTCCTCAGGTACGAGCCGACATATCCAATAACATATTCTATGACGGATATAATAGTGTAGGTGCAAACGCCGACGCTAAATTCACTGGAACCGTGAACGGTGCTACTGCATCGTCGAATATGGCCAAAACTTCTTCAGACGGTGCCCACACCCATAGTTGGTCAGGAACTACTAGCGCTACGGGTAACCATGCTCATACTGTGGGTATTGGCGCTCATACCCATTCGGTAGGTATTGGTGCTCATTCTCATACTGTTGCAATTGGTTCCCATGGACACACAATAACTGTAAATGCCACAGGAAATACAGAAAACACAGTTAAAAACGTTGCTTTTAACTATATCGTTCGTTTAGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
690b75900a15dcbb7102684be5fd17712ce0fcc8fc6cfa1f4e8c1e29f7e0fa15
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7416
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequencing of NWU_EP_32a Oluwarinde,B.O., Montso,P.K. and Ateba,C.N. 2024-10-22 — GenBank