Protein

View in Explore
Genbank accession
YP_009855707.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MAINADNVKWADQSVNDPVTGLPNKVQPTAEFQNDGLKSGEPLRRDYLNYMFNEHHGMFADLQQQINDLVLTDVGGAVLQQIYHVGAYYMSDSSQSPATRFGFGTWERVRGKFIVGMDEGDSDFNAAGKTGGSKTHSHSNNLSINSAGSHTHEVSREDWGSLQQSQGSTPNLPQPTTQGRLVTGSGRGGDELEPLGEASGDKTTSTSGSHTHTMSGGINSSSNVPPYRAAYIWVRTA
Physico‐chemical
properties
protein length:237 AA
molecular weight: 25518,47120 Da
isoelectric point:5,51073
aromaticity:0,07595
hydropathy:-0,68987

Domains

Domains [InterPro]
DC_0413
STR
1–237
DC_0413
IPR053827
ATT
79–236
IPR053827
YP_009855707.1
1 237
Architecture
STR
ATT
STR 1-78 | ATT 79-237
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AmeM_PT11-V22
[NCBI] 		2704031 Uroviricota > Caudoviricetes > Myoalterovirus >
Host Alteromonas sp.
[NCBI] 		232 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009855707.1 [NCBI]
Genbank nucleotide accession
NC_048847 [NCBI]
CDS location
range 17844 -> 18557
strand +
CDS
ATGGCAATTAATGCAGATAACGTTAAATGGGCTGACCAGAGTGTCAATGACCCTGTAACAGGACTCCCTAATAAAGTACAACCTACCGCAGAGTTTCAAAATGATGGACTCAAATCGGGAGAACCTTTACGAAGGGACTACCTAAACTACATGTTTAATGAACACCATGGGATGTTTGCTGACCTTCAACAACAAATTAATGACTTAGTGTTAACTGACGTAGGGGGCGCTGTACTACAGCAGATCTACCATGTTGGTGCATATTACATGAGTGACAGTTCTCAGAGTCCCGCAACACGATTTGGCTTTGGTACATGGGAACGTGTAAGGGGTAAGTTTATTGTTGGTATGGACGAGGGTGACTCTGACTTTAATGCTGCTGGTAAAACTGGTGGTAGTAAGACTCACTCTCACAGTAATAACCTTTCTATTAATAGCGCAGGGTCACACACCCATGAAGTTAGTAGAGAAGACTGGGGTAGCTTACAACAAAGTCAAGGTAGTACTCCTAACCTACCGCAACCTACAACTCAGGGTAGGCTAGTGACAGGTTCAGGTAGAGGAGGGGATGAGTTAGAGCCATTAGGTGAAGCTTCTGGTGACAAAACAACCTCTACTTCAGGTTCACATACCCACACGATGTCAGGTGGGATTAACTCCTCTAGTAATGTCCCTCCCTATAGAGCCGCATATATATGGGTAAGAACCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
21ee0347f110cd8d36b1102026826c0206d38038ef0e347bb95c779962a57493
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7112
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Alteromonas phage V22 represents a new genus of marine bacteriophages that requires a novel tail fiber chaperone for host recognition Gonzalez-Serrano,R., Dunne,M., Rosselli,R., Martin-Cuadrado,A.-B., Grosboillot,V., Zinsli,L., Roda-Garcia,J.J., Loessner,M.J. and Rodriguez-Valera,F. 2020-06-30 — GenBank