Protein

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Genbank accession
YP_010054358.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MPVIHIQKMPGVPKETGNVPAGTNLWRWLENSGLPSDIRIALNGRIFGPDDELSISLKQNDIVNIYCQPRGAIGDLISTILKPVTKVLSFLLPKASTPSTSTGTTVESPNNSLKSQTNIARNGEARPDNFGQVRSFPDLIQESLFEYIDDLKYVTEFMNFGLGKYTISSVRYAETNLGSLPGASHVIYNPGDVIEQIIEPYQFDGLDGQEVPGLNESEDTPIETATTTSVTSGNYAGGQLLMVIPKNTDFDYFMGLSLPHSVTLTINITYSTTSGTVTKNIELSGNIISADETETGTAPDIQYFYNFTFNNLTGANLGNLSGATINNTYFQIVDNEALVVGPYVGAVESTQVWVHVQSELGPTSGTADYLIKIWAVDDNGDAIPGTKEQLADSIDNPFTQTTKTYYRTYKFAPAYGVAKYAISIERTNNSNSGNRVTLQAAHAINIRENVVYPDDTLVKVTVKATLQPTSVTERKYNALITRWTIGYNRTTGAVDYALRPSRSFADSVLHNWIITAGQPESTIDVVRLYEIADALPDERLGYFDYTFDDEDKSIGERIQTICDAARVTVFWDDGVLSFSRDEQKSTPETVFNTRNTQADGYKMSYDMTLPGSYDGVSVQYRDPNTNKQAYVYYKVGTSGIEPGEPTKPKKFDMLYVRNLYQATDRAMLECNRLMYSRRGMEIKALADGEWVNVGDMISVVDIYDSVQQTGVIRSRSGNVFTTSEQLTAGSGLFVVITGANGNVSDRLACTVTGLNTFECALPSDFGLNIFDGVNVQSESRYAISTEVELDSTLWTVSQKTPGTDGTVSLTVTEYNDAMYAYTNPVA
Physico‐chemical
properties
protein length:826 AA
molecular weight: 90771,07410 Da
isoelectric point:4,59472
aromaticity:0,09564
hydropathy:-0,28547

Domains

Domains [InterPro]
DC_0118
STR
1–667
DC_0118 DC_0808
NF040662
Unmapped
348–820
NF040662
YP_010054358.1
1 826
Architecture
STR
RBD
STR 1-667 | RBD 684-825 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage YX3973
[NCBI] 		2500166 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010054358.1 [NCBI]
Genbank nucleotide accession
NC_054652 [NCBI]
CDS location
range 7560 -> 10040
strand +
CDS
ATGCCGGTTATTCACATTCAGAAGATGCCAGGTGTTCCAAAAGAGACGGGTAATGTTCCTGCTGGCACTAATCTGTGGCGATGGCTGGAGAATTCCGGCCTTCCATCTGATATCAGGATTGCGCTGAATGGCCGCATTTTTGGCCCTGATGATGAATTGTCGATATCGTTAAAGCAAAACGATATTGTTAACATTTACTGTCAGCCTCGCGGCGCCATTGGCGACCTTATCAGTACGATACTAAAACCTGTAACTAAGGTGCTTTCTTTCCTGCTGCCTAAAGCATCAACGCCATCAACCAGCACTGGTACAACCGTTGAATCACCCAATAACAGCCTGAAATCGCAGACCAATATCGCGCGAAACGGAGAGGCAAGGCCTGACAACTTCGGGCAGGTAAGGTCATTCCCTGATCTGATTCAGGAGTCATTATTCGAATACATTGACGACCTGAAGTATGTCACTGAGTTCATGAACTTTGGCCTTGGTAAATACACCATTTCTTCGGTTCGCTATGCGGAAACTAATCTTGGCTCCCTGCCGGGGGCAAGTCACGTCATCTACAATCCAGGCGATGTTATCGAACAAATCATTGAGCCTTACCAGTTCGACGGACTTGATGGTCAGGAGGTTCCAGGGCTTAATGAATCGGAAGACACCCCGATAGAGACAGCAACCACGACATCTGTTACCAGCGGAAATTACGCTGGCGGTCAGCTGTTGATGGTCATACCAAAAAACACCGATTTCGATTACTTTATGGGGCTGTCTCTTCCTCATTCAGTAACATTAACAATAAATATAACTTACAGCACAACGTCAGGTACTGTAACCAAAAACATTGAGCTTAGCGGCAACATCATTTCCGCCGATGAAACTGAGACAGGAACTGCGCCTGATATTCAGTATTTTTATAATTTCACCTTCAATAACCTGACTGGCGCAAATCTTGGAAACCTGAGCGGCGCAACCATCAATAATACTTATTTCCAGATTGTGGATAATGAGGCGCTTGTTGTTGGCCCATATGTTGGAGCCGTGGAGTCTACGCAGGTTTGGGTGCACGTTCAGTCTGAGCTTGGCCCTACCAGTGGCACGGCAGATTACCTGATCAAAATATGGGCGGTTGATGATAATGGCGATGCAATTCCAGGAACCAAGGAGCAGCTCGCAGACAGTATTGACAACCCATTTACTCAGACAACAAAAACCTATTATCGCACGTATAAGTTTGCTCCCGCTTATGGGGTGGCGAAGTACGCCATCAGCATTGAAAGGACAAATAACTCAAACTCTGGCAACCGCGTAACGTTGCAGGCAGCGCACGCCATCAACATCCGCGAGAATGTGGTTTATCCTGATGACACCCTTGTTAAAGTGACGGTAAAGGCCACGCTTCAGCCCACATCAGTCACTGAGCGCAAATATAATGCGCTGATTACCCGCTGGACTATTGGATATAACAGAACAACGGGGGCAGTCGACTATGCGTTAAGACCATCGAGAAGTTTTGCAGATTCAGTGCTGCATAACTGGATTATTACTGCTGGTCAACCTGAAAGCACTATTGACGTGGTAAGACTCTATGAAATAGCTGACGCACTGCCTGATGAGCGTCTTGGGTATTTTGATTACACATTTGACGATGAGGATAAATCGATCGGTGAACGAATTCAGACCATATGTGATGCAGCGCGTGTAACCGTGTTTTGGGATGATGGCGTCTTGTCTTTCTCAAGGGATGAGCAAAAATCAACTCCTGAAACCGTGTTCAATACCAGAAATACGCAGGCCGATGGCTATAAAATGTCTTATGATATGACTTTGCCAGGGTCATATGATGGCGTAAGTGTTCAATACCGCGACCCAAACACCAACAAACAGGCTTACGTTTATTATAAAGTTGGAACATCTGGTATCGAACCGGGAGAGCCGACTAAGCCGAAAAAATTCGACATGCTATATGTTCGAAACCTATATCAGGCAACAGACCGGGCCATGCTTGAGTGCAACCGTCTCATGTACTCACGCCGTGGAATGGAGATAAAAGCGCTTGCTGATGGTGAGTGGGTAAACGTTGGCGATATGATTTCCGTTGTTGACATTTATGATTCTGTACAGCAAACAGGCGTTATCCGTTCAAGGTCTGGAAACGTATTTACCACCAGTGAACAGCTCACGGCGGGAAGTGGCCTGTTTGTAGTTATAACTGGCGCCAATGGAAATGTGTCAGATCGATTGGCTTGTACCGTTACTGGATTGAATACATTCGAGTGCGCATTACCATCTGACTTCGGGTTAAACATTTTTGACGGTGTTAACGTTCAGTCAGAATCAAGATATGCCATCTCAACAGAGGTTGAGCTTGACTCAACTTTATGGACAGTCAGCCAGAAAACTCCAGGTACAGATGGCACAGTGTCTCTTACAGTAACTGAGTACAATGACGCCATGTACGCCTACACCAACCCTGTTGCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4cef8b3ac6718d01b634f07d1ca8d1dffeb424fa32365d9d31f288efb8a5726a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2948
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and Complete Genome Sequence Analysis of a Lytic Bacteriophage YX3973 infecting Klebsiella pneumoniae Huang,H. and Yu,X. 2016-12-29 — GenBank