Protein

View in Explore
Genbank accession
AAL15530.1 [GenBank]
Protein name
10
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPIQQLPMMKGMGKDFKNADYIDYLPINMLATPKEVLDSSGYLRSFPGIAKRNDVNGVSRGVEYNTAQNAVYRVCGGKLYKGEAVVGDVAGSGRVSMAHGRTSQAVGVNGQLIEYRYDGAVKTVSNWPADSGFTQYELGSVRDITRLRGRYAWSKDGTDSWFITDLEDESHPDRYSAEYRAESQPDGIIGIGSWRDFIVCFGSSTIEYFSLTGATTVGAALYVAQPSLMVQKGIAGTYCKTPFADSYAFISHPATGAPSVYIIGSGQASPIATASIEKIIRSYTADELATGVMEALRFDSHELLIIHLPRHVLVYDASSSQNGPQWCVLKTGLYDDVYRAIDFMYEGNQITCGDKSEAVTGQLQFDISSQYDKQQEHLLFTPIFKADNARCFDLEVESSTGVAQYADRLFLSATTDGINYGREQMIEQNEPFVYDKRVLWKRVGRIRRLIGFKLRVITKSPVTLSGCQIRLE
Physico‐chemical
properties
protein length:472 AA
molecular weight: 52267,38610 Da
isoelectric point:5,76804
aromaticity:0,10593
hydropathy:-0,24470

Domains

Domains [InterPro]
IPR021098
STR
4–472
IPR021098
AAL15530.1
1 472
Architecture
STR
STR 4-472
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AAL15530.1
1 472
Domain Start End Length (AA) Confidence
N-terminal 1 338 338 0,8258
Central domain 339 461 124 0,1642
C-terminal 462 472 10 0,9874
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-338
Central
339-461
C-terminal
462-472

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ST64T
[NCBI] 		173443 Uroviricota > Caudoviricetes > Lederbergvirus >
Host Salmonella typhimurium
[NCBI] 		90371 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAL15530.1 [NCBI]
Genbank nucleotide accession
AY052766 [NCBI]
CDS location
range 31270 -> 32688
strand +
CDS
ATGCCGATTCAACAACTCCCCATGATGAAGGGAATGGGTAAGGACTTCAAGAATGCCGACTACATTGATTACCTACCAATCAACATGTTGGCCACACCAAAAGAAGTCCTCGACTCATCGGGTTATTTACGCTCATTCCCGGGCATAGCGAAGCGCAACGATGTAAATGGAGTATCGCGCGGAGTTGAGTATAACACCGCTCAGAACGCTGTATATCGTGTTTGTGGCGGCAAGCTCTACAAAGGTGAAGCCGTAGTCGGTGATGTTGCCGGAAGCGGTCGCGTATCAATGGCACATGGTCGCACATCACAGGCGGTAGGCGTTAATGGTCAGCTCATCGAGTATCGCTATGATGGCGCGGTTAAAACCGTCTCAAACTGGCCTGCAGACAGCGGATTCACGCAGTATGAGTTAGGCTCAGTCCGTGACATTACTCGCTTACGTGGGCGTTATGCATGGTCAAAAGACGGTACAGATTCATGGTTTATCACTGACCTTGAAGATGAATCGCATCCTGACCGCTACAGTGCAGAATATCGCGCAGAATCGCAGCCTGACGGGATAATTGGCATAGGTTCATGGCGAGATTTCATCGTCTGCTTTGGCTCGTCGACGATAGAGTATTTCTCCCTGACAGGCGCAACCACCGTTGGCGCTGCGTTGTATGTCGCGCAGCCATCGTTAATGGTACAGAAGGGGATTGCCGGAACATACTGTAAAACGCCATTCGCTGATTCATATGCATTCATCAGTCACCCGGCTACTGGCGCACCTTCCGTCTACATCATCGGGTCAGGGCAGGCTTCACCAATTGCGACGGCCAGTATTGAGAAAATTATCCGCTCATACACGGCTGATGAACTGGCAACCGGGGTGATGGAGGCGTTGAGGTTCGATTCGCATGAACTGCTGATTATCCATCTCCCGCGTCATGTGCTGGTTTACGATGCCTCATCAAGCCAGAACGGGCCGCAATGGTGCGTACTGAAAACCGGTTTATACGACGATGTTTATCGCGCCATCGATTTCATGTACGAAGGCAACCAGATTACGTGTGGCGACAAGTCAGAAGCGGTGACAGGGCAGTTGCAATTCGACATTAGTAGTCAGTACGACAAGCAGCAAGAACATCTGCTGTTTACTCCCATCTTCAAGGCTGATAACGCCAGATGCTTCGATCTGGAAGTTGAATCCTCGACAGGCGTTGCGCAGTACGCTGACCGCCTGTTCCTGTCTGCAACCACAGACGGAATCAATTACGGCCGCGAACAGATGATTGAGCAGAATGAGCCGTTTGTGTACGACAAGAGAGTTTTATGGAAGCGTGTAGGTCGTATTCGTCGATTAATCGGATTCAAACTGCGGGTAATCACCAAATCACCAGTAACACTATCCGGGTGTCAAATTCGTCTGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93cc9dc242758f7c13997d4fbb83a6d817d7f9a8067488ccb3e6f121d1957721
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8542
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic structure of the Salmonella enterica serovar Typhimurium DT 64 bacteriophage ST64T: evidence for modular genetic architecture Mmolawa,P.T., Schmieger,H., Tucker,C.P. and Heuzenroeder,M.W. 2003 12754248 GenBank