Protein

View in Explore
Genbank accession
QIG63048.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MIPFSRLLTYANTAPDKKYGMLMRAKDGFKDVWNPGRVITLNSTPSIDSTIVLPEQEKSFRFTSGFISLAVDQMQDLNVSKQEGDYTIEFYMYAVGRNTNNWYISNGTGVTGGVKIYTSNLYLQGRTKGTSLISSNIPLNVWTHVALVQSGTDVRLYISGSLKMILNGDRWGVYNTPLRIGGYETSANAYYDQIRISNSALYTESSITPPTYPFE
Physico‐chemical
properties
protein length:215 AA
molecular weight: 24054,88950 Da
isoelectric point:8,64748
aromaticity:0,12093
hydropathy:-0,27209

Domains

Domains [InterPro]
G3DSA:2.60.120.200
STR
19–208
G3DSA:2.60.120.200
DC_2085
STR
20–208
DC_2085
IPR013320
STR
34–203
IPR013320
PF13385
LEC
81–201
PF13385
QIG63048.1
1 215
Architecture
STR
STR 19-208 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG63048.1
1 215
Domain Start End Length (AA) Confidence
N-terminal 1 13 13 0,9457
Central domain 14 204 192 0,4532
C-terminal 205 215 10 0,2034
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-13
Central
14-204
C-terminal
205-215

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE_PL
[NCBI] 		2712932 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG63048.1 [NCBI]
Genbank nucleotide accession
MT001829 [NCBI]
CDS location
range 302858 -> 303505
strand +
CDS
ATGATACCATTTTCAAGATTATTAACATATGCTAATACAGCACCAGATAAAAAATATGGTATGCTCATGAGAGCTAAAGATGGATTCAAAGATGTTTGGAATCCGGGAAGGGTTATTACATTAAACAGTACTCCTTCTATAGACAGTACTATAGTATTACCAGAACAAGAGAAATCATTTAGATTCACTTCTGGTTTTATCAGTTTAGCTGTGGATCAAATGCAAGATCTTAACGTATCTAAACAAGAAGGTGATTATACTATTGAATTTTACATGTATGCTGTTGGTAGAAATACCAATAACTGGTATATCAGTAATGGTACTGGTGTTACTGGTGGTGTAAAAATCTATACAAGTAATTTGTACTTACAGGGTAGAACGAAAGGTACTAGCCTAATTTCAAGTAATATACCACTTAATGTATGGACACATGTAGCATTAGTACAGAGCGGAACCGATGTTCGTTTATATATCAGTGGTTCTTTGAAAATGATTCTTAATGGCGATCGATGGGGTGTTTATAACACACCATTACGAATTGGTGGGTATGAAACTTCTGCTAATGCTTACTATGACCAAATCAGAATAAGCAATTCTGCGTTGTATACAGAATCATCCATAACTCCACCAACATATCCATTTGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0453a918f73c93406f563873c502ce7dcd38cec2710cbfb53479e615200fcf4f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8370
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50