Protein

View in Explore
Genbank accession
QXV76839.1 [GenBank]
Protein name
tail tube protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNWTLVTSTCLMVMPSLAVCYLANDNNLRRSLMALISQSVKNLKGGISQQPDILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLIHLINRDSVEQYYVVFTGQAVRVFDLNGKEYTVKGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVRADKTPLYTLKENGDCLINVRGGQYGRTLAFTINNVRIEYKIAQGDKPEHVQETDAQWLVKKLAGLARAHDSFKDWKFNEGSGFIHVIAPGNSQINQLSTEDGYANQLMNAVMHTSQSFSKLPIEAPNGYTVKIVGDTSKTSDMFYVQYDNVKKVWKEVAGWGVEKGLNSATMPHALVRQSDGSFAMQVLPWAQRSCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSASGILSPKSVELNLTTEFDVSDRARPYGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFISVLSANAPSKIFLYKFLYLNEEITQQAWSHWELGSNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFDSEPYRLYIDNKIKYVIPKGAYNDDTYTTTIKPVDIYGMKYWKGKFYIVASDGLVSWFEPPRGGWPNGVPVLSMSGNREGETIYIGLAIDFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNALRAGGLNVGTGQFRFPVAGNAQLNEVRIISDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:824 AA
molecular weight: 91980,01340 Da
isoelectric point:7,17577
aromaticity:0,11044
hydropathy:-0,24721

Domains

Domains [InterPro]
IPR058003
TTP
33–824
IPR058003
QXV76839.1
1 824
Architecture
TTP
TTP 33-824
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV76839.1
1 824
Domain Start End Length (AA) Confidence
N-terminal 1 171 171 0,9086
Central domain 172 376 206 0,1341
C-terminal 377 824 447 0,2513
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-171
Central
172-376
C-terminal
377-824

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CarlSpitteler
[NCBI] 		2852039 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV76839.1 [NCBI]
Genbank nucleotide accession
MZ501055 [NCBI]
CDS location
range 27541 -> 30015
strand +
CDS
ATGAATTGGACTTTGGTAACTTCAACATGCTTGATGGTGATGCCTTCACTGGCGGTCTGCTATCTCGCTAATGATAACAACTTAAGGAGGTCTCTAATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAGGGCGGTATCAGTCAACAGCCAGACATCTTAAGGTTCCCCGAACAGGGTTCCGAACAGATTAACGGCTGGTCTTCGGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTGCAAAACCACTCATCCATTTAATCAACCGCGATAGTGTAGAACAGTATTACGTTGTGTTCACAGGACAGGCAGTCCGAGTGTTCGACCTCAATGGCAAGGAGTACACCGTGAAAGGTGACTTGAGCTACGTGAAGGTAGGAAACCCGCGTGATGACCTGCGAATGGTGACGGTTGCTGACTATACGTTTATCGTCAACCGCAACATGGTGGTTCGTGCCGATAAGACACCGCTCTATACTCTGAAAGAGAACGGAGACTGTTTGATTAACGTTCGAGGTGGACAGTATGGGAGAACGCTTGCATTCACAATAAACAACGTCCGTATTGAGTACAAGATTGCACAAGGTGACAAGCCTGAACATGTGCAAGAGACCGATGCGCAGTGGCTCGTTAAGAAACTGGCAGGTCTTGCTCGTGCTCACGATTCCTTCAAGGACTGGAAGTTCAACGAGGGGTCTGGCTTCATACACGTAATCGCTCCGGGCAACAGTCAGATTAACCAGTTGTCCACCGAGGATGGCTATGCTAACCAGTTGATGAACGCTGTGATGCACACAAGCCAGTCATTCAGTAAGTTGCCAATCGAGGCTCCTAATGGATACACTGTGAAGATTGTGGGTGACACCTCTAAGACTTCCGATATGTTCTATGTCCAATATGACAACGTGAAGAAAGTCTGGAAGGAAGTCGCAGGATGGGGAGTTGAGAAGGGTCTCAATAGTGCCACTATGCCACACGCTTTGGTCCGTCAATCAGATGGCTCATTCGCTATGCAGGTTCTACCGTGGGCACAGCGCTCTTGTGGGGATATGGATACTAACCCAACTCCGTCTATCGTAGACCAGAAGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATTGTGATGTCTCGTACCTCCAAGTATTTCTCACTGTTCCCTGCGTCAGTGGCTAACCTGTCAGATGATGACCCGATTGATGTGGCTGTATCCCACAACCGTATCTCAATCCTGAAGTATGCCGTACCGTTCTCCGAAGAGTTGCTGCTATGGTCTGACCAAGCACAGTTCGTTCTGTCTGCCTCTGGCATCCTCTCACCGAAGTCTGTAGAGTTGAACCTTACGACTGAGTTCGATGTGTCCGACCGCGCACGTCCTTATGGTGTTGGTCGTGGTGTGTACTTTGCGTCACCTCGTGCCTCTTATACATCACTGAACCGCTACTATGCTGTACAGGACGTAAGTTCCGTTAAGTCTGCTGAGGATATGAGTGCTCACGTTCCAAGCTATATCCCCAACGGTGTGTTCTCCATTCGTGGTTCTGGTACTGAGAACTTTATCTCTGTGCTCTCTGCGAACGCCCCTAGTAAAATCTTCCTGTACAAATTCCTGTATCTAAACGAAGAGATTACACAACAGGCGTGGTCACATTGGGAACTTGGAAGTAACGTAACGGTTCTGGCTTGTGACTCTATTGGCTCAACTATGTACCTTGTGTTGCGCAATCAGTCACACACTTGGATGTGCCGAGCACACTTCACGAAGAACAGCATTGACTTCGATAGCGAGCCTTACCGCTTGTATATTGACAACAAGATAAAGTATGTGATTCCTAAAGGTGCCTACAACGATGACACTTACACGACCACTATCAAGCCTGTGGACATCTACGGGATGAAGTATTGGAAGGGTAAGTTCTACATCGTAGCCTCTGACGGTCTGGTATCGTGGTTCGAGCCACCTCGTGGTGGATGGCCTAATGGTGTCCCTGTGTTGTCAATGAGTGGGAACCGAGAGGGTGAGACTATTTACATTGGGTTGGCTATAGACTTCCGTTATGTGTTCTCTAAGTTCCTCATTAAGAAGACCGCCGATGATGGTTCAACAGCTACCGAGGATATTGGGCGCTTGCAGCTTCGCCGTGCGTGGGTCAACTATGAGGACTCCGGTGCATTCACTGTGGAGGTTGAGAACACCTCTCGACTCTTCAGCTACGACATGGCTGGTGCTCGCTTGGGTTCCAATGCTCTACGTGCTGGTGGACTTAATGTTGGTACTGGTCAGTTCAGATTCCCGGTTGCTGGCAACGCGCAGTTGAACGAAGTAAGGATTATCTCTGACCACACTACACCGCTCAACGTGATTGGTTGTGGATGGGAAGGTAACTACCTACGACGCTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9c7eb4b7f0a3728706604ab235360dd10429cedf541bf3aa256965271a5834e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3114
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Systematic exploration of Escherichia coli phage-host interactions with the BASEL phage collection Maffei,E., Shaidullina,A., Burkolter,M., Heyer,Y., Estermann,F., Druelle,V., Sauer,P., Willi,L., Michaelis,S., Hilbi,H., Thaler,D.S. and Harms,A. 2021 — GenBank