Protein

View in Explore
Genbank accession
XTJ56845.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,59
TSP
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADQNLKQIQFKRTSTENKAPGADIVARGEIALNTHGRTLAIYTKDENDAVVQLAGKGVPFLDTSGTLSVDGTTTLKDNVTISPNKAISFETTDLSGEITRHIVGKCATNDGWYIGAGGTSNSGILEIGTIDDGAETIQFVQRGAGNVEARKLVLLDGSGNTTLPGDLRLSTNKTVKINSGSTLVLEMGVGSNDVYIKNQRGTGVLQLTNDSNLTFRNSQVYYAMSGRGPGKSGTLLTNVENNRQAWQYTISAATASTARWVKVATIKHPGMASSQLDLMISGGIDSGHGRHYVDFITLSGRNLTSWSTNNLDNWVEWRRVGSPDKGKIPEYYVVKNDAATDSEASFDFYAKVPRYGNGLYVTVLNTAGYNGQDSGKVIIYETNQDTGGYGPAGSILVSMKQIFDSYAKPDFGDTTGTLPVNRGGTGATSAGAARNNLGLGTAAVRDVGESNGNVMEVGAYGLGGNGGKSIENITSNADMLTRLKAYGGTFWRGVTKSGVSVQNGLYSHGSGIFMNAGDTMSAINIDYASAKVRVYAANDRSLAEGNVRYNELYGTANKPSKADVGLGNLTNDTQVKKAGDTMTGDLAAPNLHASGTGTASVYVNAGSGNAHVWFRTNANERGVIWATPNTADLGQINIRAKTTGGVSAGDFSFRSDGRFDVPVAVKVGGAAMLTKDGNITSGSMFGGNLNNYLTSIKNDITAGDNKQVSKTGDTMTGNLTINANLKVENPNGTMADFGSENSDKYSRITLARKVGSGAAVAMLKVTPEGHVQFGYQTAVSTPAPSKYILVKSSGLEVEGDLVFNQTYSGAEEAVDISDKTIDLNSLIIRRSDLGTRQLYKCVSSGGGSKITNKPTSDGNFVLEVLSLRKVSDTDWSCKQTFTTKNGGVEGTYIRYGQNGSWSAWKEVVSGVQPINLGGTGATSAASARNNLGVGEGQTVKFGNLVTTDLTANGNARLVGRLNLGSTSATGVLRANESGAVVLGSSSGQNIHIRAGSADTSNGETRFEPNGNVLVGGALTSSGSLQVNGEAAMSRSLIVSQNIKNTNDNSFILMGKDSDLGFVKKSNSGAKLVFASGKSFVVAKSSATAIANPASETYTDVFKVDADGNQTVYGNSAVSRALTVSSTATINGVINANGGIIVPTTKYVQIADAPTQNNQAANKKYVDDKVASAISNAGDTYLPLAGGTVTGNLDVTGTRLKTWQLEVDGKSTLRGGLDVSSSLKVSSGNLVAADTTNAGGLFAKNGNVYCDAGSAGTNSNYWFRDSAGNVRGVIWSNGQNGDMIIRNQSGRELVFRNDGYLQLAHLAPGNTDNANTVNGIRLQRGDTIFDSFNAWQSGEYVRAGWHFYNAAGVDQWLALTDTGVKIWGSAANLRVEGVGNFWDVEIRSDRRVKSNIAKIDNALDKVSKLSGNVYDLQLPNGDTKPSAGLIAQEVQEVLPEAVTTDNDKDALLRLNYNAVIALLVESVKELKAEIEELKSK
Physico‐chemical
properties
protein length:1480 AA
molecular weight: 155692,93350 Da
isoelectric point:7,18743
aromaticity:0,06757
hydropathy:-0,30601

Domains

Domains [InterPro]
DC_1942
ATT
4–620
DC_1942 cd19958 DC_0246
DC_0468
STR
484–1006
DC_0468 IPR030392
IPR030392
CHP
1388–1443
IPR030392 Coil
XTJ56845.1
1 1480
Architecture
ATT
STR
RBD
ATT 4-620 | STR 621-1006 | RBD 1082-1480
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTJ56845.1
1 1480
Domain Start End Length (AA) Confidence
N-terminal 1 1058 1058 0,1039
Central domain 1059 1257 200 0,4101
C-terminal 1258 1480 222 0,8839
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1058
Central
1059-1257
C-terminal
1258-1480

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage 15882-3-5
[NCBI] 		3373942 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTJ56845.1 [NCBI]
Genbank nucleotide accession
PQ537374.1 [NCBI]
CDS location
range 57472 -> 61914
strand +
CDS
ATGGCCGATCAAAACTTAAAACAAATACAATTTAAAAGAACTAGCACAGAGAATAAAGCACCAGGTGCAGATATCGTAGCCCGTGGCGAAATCGCTTTGAATACACATGGGCGTACTCTTGCCATTTATACTAAAGATGAAAATGATGCCGTAGTACAGCTCGCCGGTAAAGGGGTTCCTTTCTTAGATACCTCCGGAACTCTTAGCGTTGATGGAACTACTACGTTAAAAGACAATGTAACCATTTCTCCGAATAAAGCAATTAGTTTTGAAACTACTGATTTGAGCGGTGAAATAACTCGTCATATCGTTGGCAAATGTGCTACTAATGATGGCTGGTACATTGGTGCCGGCGGTACAAGCAACAGTGGTATTCTTGAAATCGGTACTATTGATGATGGCGCTGAAACTATTCAATTCGTACAACGCGGTGCAGGCAACGTTGAAGCCCGAAAATTGGTCTTGCTTGACGGCTCTGGTAATACGACTCTTCCTGGCGATTTAAGATTATCTACCAATAAGACTGTTAAAATTAACAGTGGAAGCACTCTTGTTCTTGAAATGGGTGTAGGCTCTAACGACGTCTATATTAAAAACCAAAGAGGCACGGGTGTTCTTCAATTAACTAATGACAGTAATTTAACGTTCAGAAATTCACAGGTGTATTACGCTATGAGCGGAAGAGGTCCTGGTAAATCCGGTACTCTTCTGACGAATGTAGAAAACAATCGTCAAGCCTGGCAATATACTATTTCTGCTGCAACTGCGTCAACTGCTCGCTGGGTAAAAGTAGCTACAATAAAGCATCCAGGAATGGCTTCTTCGCAACTGGATTTAATGATTAGCGGTGGTATTGATTCTGGGCACGGTAGACATTACGTTGATTTTATCACGTTATCAGGACGAAATTTAACATCTTGGAGCACTAACAATTTAGATAACTGGGTTGAATGGCGTCGAGTTGGTTCTCCTGATAAAGGAAAGATTCCAGAGTATTACGTTGTTAAAAATGATGCTGCTACAGATTCAGAGGCTTCATTTGATTTTTACGCTAAAGTTCCTCGATACGGCAATGGGCTTTATGTTACAGTGCTAAACACTGCTGGATACAACGGCCAAGATAGCGGTAAAGTAATTATCTATGAAACCAACCAAGACACTGGTGGATATGGACCAGCTGGAAGTATTCTTGTTTCAATGAAACAGATTTTTGACAGTTACGCAAAACCAGATTTCGGCGATACTACGGGTACTCTTCCAGTTAACCGTGGTGGTACAGGTGCTACTAGCGCAGGAGCAGCTCGTAATAACTTAGGTCTTGGTACTGCTGCTGTTCGCGACGTTGGTGAATCTAACGGAAACGTGATGGAAGTTGGTGCTTATGGCTTAGGCGGTAATGGCGGTAAATCAATCGAAAACATTACCTCTAATGCTGATATGTTGACCCGTTTAAAAGCATATGGTGGTACTTTCTGGCGTGGTGTTACTAAATCTGGTGTTAGTGTTCAAAATGGTCTTTATAGCCATGGCTCCGGTATTTTTATGAATGCTGGCGATACCATGTCAGCTATTAATATCGACTACGCCAGCGCTAAAGTTCGCGTATACGCAGCTAACGACAGAAGTCTTGCTGAGGGAAATGTTAGATACAACGAACTTTATGGTACAGCAAATAAGCCATCTAAGGCTGATGTCGGACTTGGTAATCTGACAAACGATACCCAAGTTAAGAAAGCTGGCGACACCATGACCGGTGATTTAGCTGCACCTAATTTACATGCTTCCGGCACCGGTACTGCATCAGTGTATGTTAATGCAGGAAGCGGAAATGCTCATGTATGGTTTAGAACAAACGCCAATGAACGCGGTGTAATTTGGGCAACTCCAAATACAGCGGATTTAGGACAAATTAATATTCGCGCAAAAACTACTGGAGGTGTTTCTGCTGGTGATTTTAGCTTCCGTTCTGACGGTCGATTTGATGTTCCTGTAGCAGTTAAAGTCGGTGGAGCAGCAATGCTGACTAAAGACGGGAATATTACCTCTGGTTCGATGTTTGGTGGTAACCTTAACAACTATTTGACTTCCATTAAAAACGACATCACTGCTGGCGATAATAAGCAAGTAAGTAAAACTGGCGACACAATGACCGGTAACTTGACTATTAACGCTAACTTAAAAGTCGAAAACCCTAATGGAACAATGGCTGATTTTGGTTCAGAGAATTCGGATAAGTATAGCAGAATAACTCTTGCTCGCAAAGTTGGTAGCGGTGCTGCCGTAGCAATGCTTAAAGTTACTCCTGAAGGACACGTGCAATTTGGTTATCAAACTGCAGTTTCTACTCCAGCTCCTAGTAAATATATTCTAGTTAAATCCAGCGGTCTTGAGGTAGAAGGGGATTTAGTTTTTAATCAGACATATAGCGGCGCTGAAGAGGCAGTTGATATTTCCGATAAGACTATCGACCTTAATAGTCTGATTATTAGACGATCAGATTTAGGTACTCGTCAGTTATATAAATGCGTATCTTCTGGCGGTGGTTCTAAGATAACAAACAAACCTACATCTGATGGTAACTTTGTTCTTGAAGTTCTGTCTTTACGCAAGGTTTCTGATACCGATTGGTCATGTAAGCAGACCTTTACTACAAAGAACGGCGGTGTTGAAGGCACATATATCCGCTACGGACAAAATGGTTCATGGTCTGCATGGAAAGAAGTTGTTTCTGGTGTTCAGCCAATTAATTTAGGTGGTACTGGAGCAACTTCTGCAGCTTCTGCTCGTAACAACCTCGGTGTTGGTGAAGGACAAACTGTAAAATTCGGTAATTTAGTTACAACCGATTTAACCGCAAACGGAAACGCTAGATTAGTCGGAAGACTGAACCTTGGTTCTACTTCCGCAACCGGTGTATTACGGGCTAATGAATCTGGCGCAGTTGTTTTAGGTTCTTCTAGTGGTCAAAACATCCACATCAGAGCAGGAAGTGCAGATACTTCTAATGGTGAAACCCGCTTTGAGCCAAATGGAAACGTTTTAGTTGGTGGAGCTCTAACGTCTTCAGGAAGCTTGCAAGTAAATGGCGAAGCCGCGATGAGCAGAAGCTTGATCGTTTCTCAAAACATAAAGAATACTAACGATAATAGTTTTATTCTGATGGGAAAAGACTCCGATTTAGGTTTCGTTAAAAAATCTAACTCAGGCGCTAAGCTGGTATTTGCTTCAGGAAAATCATTTGTTGTTGCTAAATCATCAGCAACTGCCATAGCTAATCCAGCTTCGGAAACTTACACTGATGTGTTTAAAGTTGACGCAGATGGAAACCAAACAGTTTATGGAAACTCAGCAGTTTCTAGAGCTTTGACTGTATCAAGTACAGCAACTATTAATGGGGTTATTAATGCCAACGGCGGTATTATTGTTCCTACTACCAAGTATGTGCAAATTGCCGATGCTCCTACACAGAATAACCAAGCTGCCAACAAGAAATATGTTGATGATAAGGTTGCTTCTGCTATTAGTAACGCTGGCGATACTTATCTTCCATTAGCCGGTGGTACTGTAACTGGTAACCTTGACGTAACTGGCACCAGATTAAAAACATGGCAGTTAGAAGTTGATGGCAAAAGTACTCTAAGAGGCGGGTTAGATGTTAGTAGCAGTCTTAAAGTTTCTAGCGGAAACTTAGTCGCCGCTGACACAACCAATGCTGGTGGTCTTTTTGCTAAAAACGGTAATGTTTACTGTGATGCAGGTTCAGCTGGTACAAACTCTAACTACTGGTTCCGTGATTCTGCTGGAAATGTCAGAGGTGTTATTTGGTCAAATGGTCAAAACGGTGACATGATTATCCGTAACCAAAGTGGCCGAGAGCTTGTATTCAGAAATGATGGATATCTGCAATTAGCCCACTTAGCACCAGGAAACACAGATAATGCAAACACCGTAAATGGAATACGTTTACAGCGCGGTGATACGATTTTCGATAGCTTTAACGCATGGCAGTCGGGTGAATATGTTCGCGCTGGATGGCATTTCTATAACGCCGCTGGAGTTGACCAGTGGTTAGCACTTACAGATACTGGTGTAAAAATCTGGGGTAGTGCTGCTAATCTACGCGTTGAAGGTGTTGGTAATTTCTGGGACGTTGAAATTCGTTCTGACCGTCGTGTGAAATCAAATATTGCTAAGATTGATAACGCTCTTGATAAAGTGTCGAAGCTATCTGGTAATGTTTATGATTTACAGCTTCCAAATGGTGATACTAAACCATCGGCTGGCCTTATCGCACAAGAAGTGCAGGAAGTTCTTCCTGAAGCAGTTACAACTGATAACGATAAAGATGCATTACTTCGTTTAAACTATAATGCAGTAATTGCGTTATTAGTCGAATCTGTTAAAGAGCTTAAAGCAGAAATTGAAGAACTTAAATCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f7474b2ddec299097b980904e015ec6e637b7873ec8fdf95cc64fde8e50cb0e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4981
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage training: Klebsiella pneumoniae Burke,K.A., Filippov,A.A., Nikolich,M.P. and Peters,T.L. 1997-09 — GenBank