Protein

View in Explore
Genbank accession
WCZ57975.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIDYNGLKTIFGEKLPESHIFFATVAAHKYVPSYAFLRRELGLSSAHTNRKVWKKFVEAYGKAVPSAPPTPPLTLSKDLTASMSVEEGAALTLSVTATGGTGPYTYAWTKDGSPIPEASGATYTKPAAATDDSGAYKVTVTDSKQVSKDSTTCAVTVNPGVGG
Physico‐chemical
properties
protein length:163 AA
molecular weight: 17110,09180 Da
isoelectric point:8,57470
aromaticity:0,09202
hydropathy:-0,20184

Domains

Domains [InterPro]
IPR048804
ATT
2–60
IPR048804 IPR007110
DC_0400
STR
2–162
DC_0400
IPR013783
STR
79–157
IPR013783
IPR036179
RBD
79–157
IPR036179
PF13927
STR
82–141
PF13927
WCZ57975.1
1 163
Architecture
ATT
STR
ATT 2-60 | STR 61-163
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K38
[NCBI] 		3027626 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57975.1 [NCBI]
Genbank nucleotide accession
OQ291035.1 [NCBI]
CDS location
range 100923 -> 101414
strand -
CDS
ATGATTGATTATAATGGTCTAAAGACCATTTTTGGTGAAAAACTACCAGAATCTCATATCTTCTTTGCTACGGTTGCTGCGCATAAATATGTTCCTAGCTATGCTTTTCTGCGTAGAGAACTAGGACTTTCATCTGCGCATACTAACCGTAAAGTATGGAAGAAATTTGTAGAGGCTTATGGTAAAGCAGTTCCTTCTGCTCCTCCTACCCCACCATTAACTCTTTCTAAAGATTTAACTGCTAGCATGTCAGTGGAAGAGGGAGCAGCATTAACACTTTCTGTTACTGCAACTGGGGGTACTGGTCCATATACTTATGCGTGGACTAAAGATGGCTCTCCTATTCCGGAAGCTTCAGGAGCTACCTATACTAAGCCTGCAGCAGCTACTGATGATTCTGGAGCCTATAAAGTAACTGTAACAGATAGTAAGCAAGTAAGCAAGGACTCTACTACATGTGCTGTGACAGTTAATCCTGGTGTTGGAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1994566cc3d6a07393e6d95a6b145fa31be24b3ffebf1cbcf02564c4338d059f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7592
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K38 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank