Protein

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Genbank accession
ANT45224.1 [GenBank]
Protein name
short tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFEQPKPHIAYRGGDEASGGVFVVETIAPAGWELESHRHRHAHTSVLVSGVADVTIDGVTRRLEGYQLVTVPANTVHKVVAVTPIVWLCLWAGDLAPRQEVEDSLRLSDTHKLSSACGNCPGGCEPA
Physico‐chemical
properties
protein length:127 AA
molecular weight: 13634,26570 Da
isoelectric point:5,73104
aromaticity:0,05512
hydropathy:-0,06457

Domains

Domains [InterPro]
IPR014710
Unmapped
3–101
IPR014710
DC_0531
STR
4–121
DC_0531
IPR011051
Unmapped
17–102
IPR011051
IPR013096
STR
24–90
IPR013096
ANT45224.1
1 127
Architecture
STR
STR 4-121 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage Xoo-sp2
[NCBI] 		1852622 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas oryzae pv. oryzae
[NCBI] 		64187 Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas oryzae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANT45224.1 [NCBI]
Genbank nucleotide accession
KX241618.1 [NCBI]
CDS location
range 826 -> 1209
strand -
CDS
ATGTTTGAGCAGCCTAAGCCCCACATCGCCTATCGCGGCGGTGACGAGGCGTCCGGCGGCGTGTTCGTCGTGGAGACGATCGCGCCCGCCGGCTGGGAGCTCGAGTCCCACCGCCACCGGCACGCGCACACGTCCGTCCTGGTCTCCGGCGTGGCCGACGTCACGATCGACGGGGTCACCAGGCGGCTGGAGGGCTACCAGCTGGTAACCGTGCCCGCCAACACCGTGCACAAGGTCGTCGCCGTCACCCCCATCGTCTGGCTCTGCCTCTGGGCGGGGGACCTGGCGCCACGCCAGGAGGTGGAGGACTCCCTCCGCCTCTCGGACACCCACAAACTAAGCTCCGCCTGCGGCAACTGCCCGGGCGGCTGTGAACCCGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ccd3b3319734de6b03c34cc9eeb17cea28d6b92e7bbb2108ae4a7e62780098f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7228
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Novel Xanthomonas Oryzae pv. Oryzae Phage Xoo-sp2 as Possible Biocontrol Agent in Plant Dong,Z., Liu,J. and Peng,D. 2018-10-01 — GenBank