Protein

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Genbank accession
AGH57084.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TF
Evidence RBPdetect2
Probability 0,69
Protein sequence
MGMNIWDSRESGSTVVTDEKGVTRLAAEGDSLVASCEEDQLIVENPTCTEVISLGDGQYLRGEKGETGEEPDHEWIDTSLRFRKPDGSWGWLVDLQGEKGEKGDQGIQGPQGIGIEGPQGNDGITRYAWVKYADTTTPAPEEMYQTPDGRIYFGIAYNRLLDEGEGDPQEFDYTQYKWSKIQGTDGIPGTPGGVGPTGPAGVGFTWIGEFPEHPTAEDIGRPLEDGDTYFNTTDNKVYTYAGGWHTMLESGGEGPIGPQGAPGGGFEYQGEFTSSPSGALVNWLYRNINNDLFYMYDGTAWILATSDGKDSPDGAPCGNGLRFFTTYHDSATTPARPTLDGDTNGWNPNAHSFAPGTIKWVSQKIATEPELGVWNDPIDISTHEYRGPVGFRGSQSILIPIPGWNGNWDDNIAASACTGGAPQEWDIVTMYKSEDPAVQETRRWAFNPQNSIWEWLVYNYVFLGDVLVDGTLDAQKINVNSTLTVGTGNNVAKVSGEDNIRIAVGNADKSLAPFRVFQDGSVIIDNPPSNINNDDLDVPTTYRQASAPTAPIVTGSMWYETDNQNKPYRWNGTVWQEVRDDGVITDAKANGTVYPDQDNLSISGNYVAGISGWAIDSNGNSEFNNSTFRGDVYASSLTLTGSGSQLTSDNYSPGLEGWTINSNGTAEFNDVTVRGTGYFTDGVFDGTIYAENISGDVVSAIVKDNPVSYTGFTPVNTWRTVATPVTILNSRPYERNLRLTVSNGGTGFSIYINSDESFNNTIMRFRLINTTTNNIAWEYEYTFDASGGGRLTQGFFPSIDAVIPANETAGTYELQVSSSREIDFIRYMYRELGISWQAITSSVVGHLFMNSKELS
Physico‐chemical
properties
protein length:855 AA
molecular weight: 93252,69120 Da
isoelectric point:4,27670
aromaticity:0,11111
hydropathy:-0,50351

Domains

Domains [InterPro]
DC_2056
STR
4–185
DC_2056 DC_2093 DC_1333 DC_0582 DC_1439
DC_1439
RBD
638–855
DC_1439
AGH57084.1
1 855
Architecture
STR
STR
STR
RBD
STR 4-185 | STR 208-259 | STR 288-575 | RBD 593-855
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH57084.1
1 855
Domain Start End Length (AA) Confidence
N-terminal 1 407 407 0,9973
Central domain 408 693 287 0,0836
C-terminal 694 855 161 0,9608
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-407
Central
408-693
C-terminal
694-855

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VBP47
[NCBI] 		754073 Uroviricota > Caudoviricetes > Schitoviridae > Stoningtonvirus > Stoningtonvirus VBP47
Host Vibrio parahaemolyticus RIMD 2210633
[NCBI] 		223926 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
99d52ff735a7585afc3c31ee466c6be7b981df54f4620d16ae90aef926058b9b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6530
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50