Protein

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Genbank accession
QVJ12740.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWKNAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYDSGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRATWHSNEPSDPIVTFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAYDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDRYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETDEEVTVASEQVTVTGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDDEFVDWKSVDGIGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV
Physico‐chemical
properties
protein length:771 AA
molecular weight: 85385,41060 Da
isoelectric point:4,97645
aromaticity:0,11025
hydropathy:-0,28016

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVJ12740.1
1 771
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9500
Central domain 173 371 200 0,5622
C-terminal 372 771 399 0,2737
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-371
C-terminal
372-771

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA11
[NCBI] 		2833430 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ12740.1 [NCBI]
Genbank nucleotide accession
MZ089731 [NCBI]
CDS location
range 38035 -> 40350
strand -
CDS
ATGGCAAAGACGACTAACGCTGCCGAGTTTAACACTTTTGTTGGGGGGCTAATCACCGAGGCTAGCCCCTTAACTTTTCCTCAAAATGCCTCCATTGATGAAGTCAATTTCATTCTTAACCGAGACGGGTCTAGAAATAGACGCAACGGTATGGACTTTGAAAATGGCGCCACTAAAGTTGTATGCAACACGTTAGTCCCAGCAGATGGTACTATTGCCGTTACCTCACATAACTGGAAGAATGCTGGTGGTGAAGTTGGTAGATGGATTAGCCTTGTGCAAGTAGGCACGGAGTTGAAGTTTTTCCAGACTACTGGAGAGACACTATCCGAGGGCAACTTCTACAACTACCAGTTTGTTAATATGTCTCCAAGTCATAAACTCTCTTATGCTGTAGTAGACGGTTTGCTGGTAGTAGCTAACGGCAGTAGAGATATTTATGTCTTCGAATACGACAGCGGCTCTGTTAGCGTAACAACCAAAAGACTGTTAGTTAGAGATTTGTTTGGCGTCCAGGATATTGTGAATGGTGTTGATCTTAGGCAAGGTAACGACATTGCAACCAGACCGACTGTTCAAACTAACGCTCATATCTACAACTTGAGAAACCAGACGTTTGGTGTACCAAGGGCGACCTGGCATAGTAACGAACCGTCTGATCCTATTGTAACTTTTAGATCAGCAGCTTCTGGTAAGTTTCCATCCAACTCTGACTCTGTGAATTTGGCACTGTCCAAGCGTGCAGATGTTGAGCCAAGCACTACTGATAGATTTAGAGCCGAAGACATTGTACTCAACCCAATTGGTACGTATGAGACAGCCAGAGGCTTCTTTATCATTGACGCAATGGCTCGTGGTAAAAGTAGACTAGAAGAAATAGTGAAGCTGAAGCAGAGATATCCCTCTTTGTCTTTTGGTGTATCTTCTTTACCACAAGATGAAACCCCAGGTGGAGCTAGTGTAGTTTGTGAATACGCTGGCAGGGTTTGGTATGCTGGTTTCTCTGGTCAGATTATTGATGGTGATGATCAATCACCTAGACTTGTTTCCTACATTTTGTTTAGCCAATTGGTAGATAGTCCAGCAGATATTGTGAACTGCTACCAAGATGGTGATCCTACCAGTACAGAAGAGCCAGAACTAGTAGATACTGATGGCGGATTTATTCGTATCGAAGGCGCCTACGACATTATCAATTTGGTCAATGTCGGAAGTGCTGTAATGGTAGTGGCAGCTAACGGCATATGGATGATCCAAGGTGGTAGTGACTATGGATTCACTGCAACCAACTACCTTGTTACTAAGATCAGTGAGCATGGCTGCTCTTCTCCTAACTCCGTAGTGGTTGTTGATAACAGTTTCATGTATTGGGGGGATGATGGTATTTACCATTTGACCAGAAACCAATACGGTGACTATGTAGCAAACAACCTCACTGAGAAGACCATTCAGAAGTATTATGAAAAGATTCCATCTGATGCTATTCTAAACGCTACTGGTTTTTATGACAGGTACGATAAGAAAGTTAAATGGCTTTACAATACTGTCTTGGATGGTAGGACTGAGCCAGTCACTGAGTTAGTTTTTGATCTTGCCCTGGGCGCATTTTACCCATCTAAGATTGGAAGCTTGACTGCTGGTAGGTTGCCAATTCCTGTAGGCTCTGTAAAAATTCCACCCTACAAATTGGTGGAGACTGACGAAGAAGTAACCGTAGCCTCTGAGCAGGTAACTGTCACTGGGGAATTGGTCACCGTTAAGGTTAGCACTAGATCGCCAGTAATCAGGGAAACCAAATACATCATTGTAGAAAAGTTGTCCTCACCTATGCGTATCAGCTTTGGTGGATATACAGATGATGAGTTTGTTGACTGGAAGTCGGTTGACGGCATAGGAGTTGACGCACCTGCTTATCTGTTGACAGGGTATTTGGCTGGTGGTGATTATCAAAGAGAAAAGTTTGTCCCATACATCACTTTCCACTTCAAGAAGACTGAGGATGGTTTTGTAGAAGACGCTGAAGGTGATTGGACACCAACCAACCAATCCTCGTGCATGGTTCAGAGTCAGTGGTCTTGGACTAACTCTCCGGCCTCTAACAAATGGGGTAGGACTTGGCAAGCCTACAGATTTAGAAGACACTTTTTCCCAGACAACATCGATAACCAATTTGATGATGGCAACTCTGTAGTAGAAACCAAAAGCAGGTTGCGGGGAAGTGGTAAAGTCTTGTCTTTGTATATCACCACTGAACCTAAGAAGAACCTTCACATTTATGGTTGGTCTATGTTGGTGGATGTAAATGGAACAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b44cdd0db489389b024324c950493eb9c8948414545235a3d7748a14542f032d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3054
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank