Protein

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Genbank accession
QMP81962.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAFSWIQPSFAGGEIGPSLYGRIDMSKYQVALRKCDNFIVRQYGGVENRPGTRFVGPAKYPDRKCRLIPFQFSTVQTYALEFGNNYMRVIKDGAYVLTTSNVIYELATPYSDTDLFRIKFTQSADVLTLVHPAYPPKELRRYAHDNWQIVDVTTKNGPFEDINVDETVKVYASASTGTITLTASSAIFGAEQVGKLFYLEQPAVDSVPVWETSKTTAINDVRRADSNYYRANTAGKTGTLRPSHTEGMSWDGWGGTGSDDTGIQWEYLHSGFGIAKITAVAGDGLTATADVVSFIPSQVVGSANASYKWAKYAWNSVNGYPSTVVYYQQRLYFAASSAYPQTIWASRTGDYKDFGKNNPIQDDDRIIYTYAGRQVNEIRHLIDVGNLVALTSGGEYTISGDQNKVLTPSAFSFSSQGNNGSSNVPPIAVANIALFIQEKGSVVRDLAYYFDVDGYQGTDLTILANHLFQKHSIVDWSFCIVPYSSAFCIRDDGKLLVLTYLRDQQVFAWAPQSSAGKYESTCSISEGSEDAVYFVVNRTINGQTVRYIERLSSRLFTSDEDAFFVDCGLSYDGRNTSSRTMTISGGTGDWSYQVDYPVTVSGGAYFVNTDVGAQIQFPYTGTDPDTNEPVAKEVRGDIISVTSNTAVVVRFNRNVPPVLRNVATTNWHMARQTFGGLSHLEGQTVNILSDASVEPQKVVTGGSVTLESPGAVVHIGLPITAEFETLDININGQETLLDKKQVIPTVTMVVNASRGIWATTPGGTWYEYPQREFEFYDDPVDDATGKVEVKLDSNWDKNGRVKVRQLDPLPLSVLAVLPRLTVGGF
Physico‐chemical
properties
protein length:825 AA
molecular weight: 90847,33360 Da
isoelectric point:5,15418
aromaticity:0,11515
hydropathy:-0,23673

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMP81962.1
1 825
Domain Start End Length (AA) Confidence
N-terminal 1 159 159 0,9900
Central domain 160 368 210 0,2827
C-terminal 369 825 456 0,0998
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-159
Central
160-368
C-terminal
369-825

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 66FD
[NCBI] 		2758313 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Heidelberg
[NCBI] 		611 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMP81962.1 [NCBI]
Genbank nucleotide accession
MT580117 [NCBI]
CDS location
range 38381 -> 40858
strand -
CDS
ATGGCTTTTAGCTGGATTCAACCGAGCTTTGCCGGTGGTGAAATTGGTCCGTCACTGTATGGCCGCATTGATATGTCAAAGTATCAGGTGGCGCTGCGCAAGTGCGATAACTTCATTGTTCGCCAATATGGTGGTGTAGAGAACAGACCAGGTACGCGCTTTGTTGGTCCTGCTAAATACCCTGATCGCAAGTGCCGGTTAATCCCATTTCAGTTCTCGACCGTACAGACCTATGCTCTGGAGTTCGGGAACAACTATATGCGCGTTATCAAAGACGGCGCGTATGTTCTGACGACCAGCAATGTGATTTATGAGCTGGCGACGCCGTATTCTGACACTGACCTTTTCCGTATTAAATTCACGCAGAGCGCCGACGTTCTGACGCTGGTGCATCCCGCATACCCGCCGAAAGAACTGCGCCGCTATGCGCACGACAACTGGCAGATCGTCGATGTCACCACCAAAAACGGGCCGTTCGAAGATATCAACGTTGACGAGACTGTGAAGGTATACGCCAGCGCCAGCACCGGAACAATTACACTGACGGCAAGCTCTGCAATATTCGGTGCTGAACAGGTCGGAAAACTGTTCTATCTCGAGCAGCCAGCGGTTGATTCCGTCCCGGTATGGGAAACCAGTAAAACCACAGCAATAAACGACGTTCGTCGTGCAGACAGCAACTACTACCGCGCGAATACTGCTGGTAAGACCGGGACCCTTCGCCCGTCTCACACTGAAGGTATGTCTTGGGATGGATGGGGCGGTACCGGATCAGATGATACCGGGATCCAGTGGGAGTACCTGCACAGCGGTTTCGGCATTGCAAAAATAACAGCAGTGGCTGGCGATGGCCTCACAGCAACTGCCGATGTGGTTTCGTTCATTCCATCTCAGGTTGTTGGCTCCGCTAACGCCAGCTATAAGTGGGCAAAATACGCGTGGAACAGCGTTAACGGCTACCCGAGCACCGTTGTTTACTACCAGCAGCGCCTGTACTTTGCCGCGTCTTCTGCGTATCCGCAAACCATCTGGGCAAGCCGAACAGGAGATTATAAGGACTTCGGCAAGAACAACCCTATTCAGGATGACGATCGCATCATCTACACCTACGCCGGACGTCAGGTGAATGAGATCCGTCACCTTATTGATGTTGGTAACCTGGTCGCTCTGACATCTGGCGGGGAATATACGATATCCGGGGACCAGAATAAGGTCCTCACGCCATCGGCTTTCTCGTTCAGCTCTCAGGGGAATAACGGATCAAGTAACGTGCCACCTATCGCTGTGGCTAACATCGCATTGTTCATCCAGGAGAAAGGCAGCGTTGTGCGCGATCTGGCCTACTATTTCGACGTTGACGGATATCAAGGAACTGACCTGACCATACTGGCAAACCACCTGTTCCAGAAACACAGCATTGTTGACTGGTCATTCTGCATTGTGCCGTACAGCAGCGCTTTCTGCATTCGTGATGACGGTAAATTACTGGTGCTCACGTATCTGCGCGATCAGCAGGTTTTCGCCTGGGCACCGCAGTCCAGCGCTGGTAAATACGAAAGTACCTGCTCAATCAGTGAAGGCAGCGAGGATGCTGTTTACTTCGTGGTTAACCGTACTATCAATGGGCAGACCGTACGTTACATCGAACGCCTGTCCAGTCGCCTGTTTACCAGTGATGAAGATGCGTTCTTTGTCGATTGTGGCCTGAGCTACGATGGGCGCAATACATCATCCCGCACAATGACTATCAGCGGTGGCACAGGTGACTGGAGCTATCAGGTTGATTACCCGGTTACAGTAAGCGGTGGTGCGTATTTCGTTAATACTGATGTAGGTGCTCAGATTCAGTTCCCATATACCGGCACAGATCCAGACACCAACGAACCGGTGGCTAAAGAGGTGCGCGGCGACATTATTTCAGTGACCAGCAATACTGCGGTTGTCGTGCGCTTCAACCGTAACGTTCCTCCGGTGCTTCGCAATGTGGCCACAACTAACTGGCATATGGCGCGCCAGACGTTCGGTGGCTTGTCGCACCTCGAAGGTCAGACAGTAAACATCCTGTCAGATGCCAGCGTTGAGCCTCAGAAGGTTGTCACTGGTGGTTCAGTCACGCTGGAGTCACCAGGTGCAGTTGTGCATATCGGACTTCCTATCACTGCTGAATTCGAAACTCTGGACATCAATATCAACGGGCAGGAAACGCTGCTGGATAAAAAGCAGGTCATTCCTACTGTCACGATGGTGGTCAACGCGAGCCGTGGAATCTGGGCAACAACGCCTGGCGGAACATGGTATGAGTATCCGCAGCGTGAATTTGAGTTCTACGACGATCCTGTTGATGACGCTACCGGCAAGGTTGAAGTGAAACTCGACAGCAACTGGGATAAAAACGGACGCGTTAAGGTTCGCCAGCTTGACCCACTTCCGCTTTCTGTTCTTGCTGTATTGCCTCGCCTTACCGTCGGAGGATTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
994048edd865a18d05e9bb54cc02cdf2b155846c1eb973efbe94f463630e7d0b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3211
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phenotypic and genotypic characterization of three lytic podoviruses infecting Salmonella serovars Riquelme-Neira,R.A. 2013 — GenBank